RNA–Protein interactions for RNA: ENST00000541087.1

MDM1-212, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-212ENST00000541087 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
MDM1-212ENST00000541087 ABCC9O60706 1549 aa22.92■■□□□ 1.26
MDM1-212ENST00000541087 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
MDM1-212ENST00000541087 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
MDM1-212ENST00000541087 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
MDM1-212ENST00000541087 NACADO15069 1562 aa21.32■■□□□ 1
MDM1-212ENST00000541087 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
MDM1-212ENST00000541087 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
MDM1-212ENST00000541087 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
MDM1-212ENST00000541087 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
MDM1-212ENST00000541087 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
MDM1-212ENST00000541087 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
MDM1-212ENST00000541087 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
MDM1-212ENST00000541087 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
MDM1-212ENST00000541087 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
MDM1-212ENST00000541087 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
MDM1-212ENST00000541087 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
MDM1-212ENST00000541087 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
MDM1-212ENST00000541087 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
MDM1-212ENST00000541087 CUX2O14529 1486 aa20.06■□□□□ 0.8
MDM1-212ENST00000541087 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
MDM1-212ENST00000541087 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
MDM1-212ENST00000541087 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
MDM1-212ENST00000541087 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
MDM1-212ENST00000541087 NESP48681 1621 aa19.51■□□□□ 0.71
MDM1-212ENST00000541087 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
MDM1-212ENST00000541087 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
MDM1-212ENST00000541087 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
MDM1-212ENST00000541087 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
MDM1-212ENST00000541087 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
MDM1-212ENST00000541087 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
MDM1-212ENST00000541087 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
MDM1-212ENST00000541087 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
MDM1-212ENST00000541087 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
MDM1-212ENST00000541087 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
MDM1-212ENST00000541087 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
MDM1-212ENST00000541087 WDR62O43379 1518 aa19.07■□□□□ 0.64
MDM1-212ENST00000541087 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
MDM1-212ENST00000541087 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
MDM1-212ENST00000541087 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
MDM1-212ENST00000541087 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
MDM1-212ENST00000541087 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
MDM1-212ENST00000541087 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
MDM1-212ENST00000541087 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
MDM1-212ENST00000541087 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
MDM1-212ENST00000541087 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
MDM1-212ENST00000541087 WIZO95785 1651 aa18.7■□□□□ 0.58
MDM1-212ENST00000541087 CFTRP13569 1480 aa18.7■□□□□ 0.58
MDM1-212ENST00000541087 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
MDM1-212ENST00000541087 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
MDM1-212ENST00000541087 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
MDM1-212ENST00000541087 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
MDM1-212ENST00000541087 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
MDM1-212ENST00000541087 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
MDM1-212ENST00000541087 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
MDM1-212ENST00000541087 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
MDM1-212ENST00000541087 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
MDM1-212ENST00000541087 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
MDM1-212ENST00000541087 CHD1O14646 1710 aa18.43■□□□□ 0.54
MDM1-212ENST00000541087 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
MDM1-212ENST00000541087 TOPBP1Q92547 1522 aa18.39■□□□□ 0.54
MDM1-212ENST00000541087 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
MDM1-212ENST00000541087 FBLN2P98095 1184 aa18.34■□□□□ 0.53
MDM1-212ENST00000541087 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
MDM1-212ENST00000541087 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
MDM1-212ENST00000541087 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
MDM1-212ENST00000541087 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
MDM1-212ENST00000541087 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
MDM1-212ENST00000541087 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
MDM1-212ENST00000541087 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
MDM1-212ENST00000541087 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
MDM1-212ENST00000541087 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
MDM1-212ENST00000541087 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
MDM1-212ENST00000541087 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
MDM1-212ENST00000541087 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
MDM1-212ENST00000541087 SOGA1O94964 1423 aa18.08■□□□□ 0.49
MDM1-212ENST00000541087 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
MDM1-212ENST00000541087 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
MDM1-212ENST00000541087 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
MDM1-212ENST00000541087 GRIN2BQ13224 1484 aa18■□□□□ 0.47
MDM1-212ENST00000541087 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
MDM1-212ENST00000541087 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
MDM1-212ENST00000541087 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
MDM1-212ENST00000541087 CUX1P39880 1505 aa17.83■□□□□ 0.45
MDM1-212ENST00000541087 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
MDM1-212ENST00000541087 ILDR1Q86SU0 546 aaPredicted RBP17.78■□□□□ 0.44
MDM1-212ENST00000541087 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
MDM1-212ENST00000541087 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
MDM1-212ENST00000541087 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
MDM1-212ENST00000541087 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
MDM1-212ENST00000541087 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
MDM1-212ENST00000541087 NUP160Q12769 1436 aa17.72■□□□□ 0.43
MDM1-212ENST00000541087 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
MDM1-212ENST00000541087 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
MDM1-212ENST00000541087 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
MDM1-212ENST00000541087 ABCC10Q5T3U5 1492 aa17.66■□□□□ 0.42
MDM1-212ENST00000541087 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
MDM1-212ENST00000541087 KDM6BO15054 1643 aa17.61■□□□□ 0.41
MDM1-212ENST00000541087 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
MDM1-212ENST00000541087 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms