RNA–Protein interactions for RNA: ENST00000541056.1

ATF7IP-215, Transcript of activating transcription factor 7 interacting protein, humanhuman

TSL 4

Gene ATF7IP, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7IP-215ENST00000541056 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
ATF7IP-215ENST00000541056 ABCC9O60706 1549 aa16.45■□□□□ 0.22
ATF7IP-215ENST00000541056 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
ATF7IP-215ENST00000541056 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
ATF7IP-215ENST00000541056 NACADO15069 1562 aa15.51■□□□□ 0.07
ATF7IP-215ENST00000541056 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
ATF7IP-215ENST00000541056 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
ATF7IP-215ENST00000541056 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
ATF7IP-215ENST00000541056 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
ATF7IP-215ENST00000541056 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
ATF7IP-215ENST00000541056 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
ATF7IP-215ENST00000541056 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
ATF7IP-215ENST00000541056 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
ATF7IP-215ENST00000541056 DCAF1Q9Y4B6 1507 aa14.99□□□□□ -0.01
ATF7IP-215ENST00000541056 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
ATF7IP-215ENST00000541056 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
ATF7IP-215ENST00000541056 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
ATF7IP-215ENST00000541056 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
ATF7IP-215ENST00000541056 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
ATF7IP-215ENST00000541056 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
ATF7IP-215ENST00000541056 CUX2O14529 1486 aa14.27□□□□□ -0.12
ATF7IP-215ENST00000541056 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
ATF7IP-215ENST00000541056 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
ATF7IP-215ENST00000541056 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
ATF7IP-215ENST00000541056 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
ATF7IP-215ENST00000541056 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
ATF7IP-215ENST00000541056 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
ATF7IP-215ENST00000541056 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
ATF7IP-215ENST00000541056 NESP48681 1621 aa14.07□□□□□ -0.16
ATF7IP-215ENST00000541056 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
ATF7IP-215ENST00000541056 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
ATF7IP-215ENST00000541056 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
ATF7IP-215ENST00000541056 PDS5BQ9NTI5 1447 aa13.95□□□□□ -0.18
ATF7IP-215ENST00000541056 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
ATF7IP-215ENST00000541056 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
ATF7IP-215ENST00000541056 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
ATF7IP-215ENST00000541056 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
ATF7IP-215ENST00000541056 WIZO95785 1651 aa13.8□□□□□ -0.2
ATF7IP-215ENST00000541056 WDR62O43379 1518 aa13.77□□□□□ -0.21
ATF7IP-215ENST00000541056 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
ATF7IP-215ENST00000541056 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
ATF7IP-215ENST00000541056 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
ATF7IP-215ENST00000541056 CFTRP13569 1480 aa13.66□□□□□ -0.22
ATF7IP-215ENST00000541056 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
ATF7IP-215ENST00000541056 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
ATF7IP-215ENST00000541056 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
ATF7IP-215ENST00000541056 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
ATF7IP-215ENST00000541056 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
ATF7IP-215ENST00000541056 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ATF7IP-215ENST00000541056 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
ATF7IP-215ENST00000541056 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
ATF7IP-215ENST00000541056 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
ATF7IP-215ENST00000541056 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
ATF7IP-215ENST00000541056 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
ATF7IP-215ENST00000541056 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
ATF7IP-215ENST00000541056 ZNF608Q9ULD9 1512 aaPredicted RBP13.4□□□□□ -0.26
ATF7IP-215ENST00000541056 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
ATF7IP-215ENST00000541056 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
ATF7IP-215ENST00000541056 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
ATF7IP-215ENST00000541056 CHD1O14646 1710 aa13.3□□□□□ -0.28
ATF7IP-215ENST00000541056 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
ATF7IP-215ENST00000541056 FBLN2P98095 1184 aa13.28□□□□□ -0.28
ATF7IP-215ENST00000541056 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATF7IP-215ENST00000541056 CYB5RLQ6IPT4 315 aa13.27□□□□□ -0.29
ATF7IP-215ENST00000541056 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
ATF7IP-215ENST00000541056 SOGA1O94964 1423 aa13.22□□□□□ -0.29
ATF7IP-215ENST00000541056 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
ATF7IP-215ENST00000541056 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
ATF7IP-215ENST00000541056 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
ATF7IP-215ENST00000541056 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
ATF7IP-215ENST00000541056 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
ATF7IP-215ENST00000541056 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
ATF7IP-215ENST00000541056 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
ATF7IP-215ENST00000541056 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
ATF7IP-215ENST00000541056 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
ATF7IP-215ENST00000541056 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
ATF7IP-215ENST00000541056 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
ATF7IP-215ENST00000541056 CUX1P39880 1505 aa13.13□□□□□ -0.31
ATF7IP-215ENST00000541056 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
ATF7IP-215ENST00000541056 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
ATF7IP-215ENST00000541056 PBRM1Q86U86 1689 aa13.08□□□□□ -0.31
ATF7IP-215ENST00000541056 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
ATF7IP-215ENST00000541056 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
ATF7IP-215ENST00000541056 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
ATF7IP-215ENST00000541056 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
ATF7IP-215ENST00000541056 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
ATF7IP-215ENST00000541056 GRIN2AQ12879 1464 aa12.96□□□□□ -0.34
ATF7IP-215ENST00000541056 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
ATF7IP-215ENST00000541056 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
ATF7IP-215ENST00000541056 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
ATF7IP-215ENST00000541056 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
ATF7IP-215ENST00000541056 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
ATF7IP-215ENST00000541056 NUP160Q12769 1436 aa12.9□□□□□ -0.34
ATF7IP-215ENST00000541056 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
ATF7IP-215ENST00000541056 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
ATF7IP-215ENST00000541056 ERCC6L2Q5T890 1561 aa12.87□□□□□ -0.35
ATF7IP-215ENST00000541056 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
ATF7IP-215ENST00000541056 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
ATF7IP-215ENST00000541056 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
ATF7IP-215ENST00000541056 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms