RNA–Protein interactions for RNA: ENST00000541044.5

RIMKLB-210, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 3

Gene RIMKLB, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-210ENST00000541044 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
RIMKLB-210ENST00000541044 ABCC9O60706 1549 aa16.64■□□□□ 0.25
RIMKLB-210ENST00000541044 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
RIMKLB-210ENST00000541044 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
RIMKLB-210ENST00000541044 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
RIMKLB-210ENST00000541044 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
RIMKLB-210ENST00000541044 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
RIMKLB-210ENST00000541044 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
RIMKLB-210ENST00000541044 NACADO15069 1562 aa15.46■□□□□ 0.07
RIMKLB-210ENST00000541044 BICRAQ9NZM4 1560 aa15.25■□□□□ 0.03
RIMKLB-210ENST00000541044 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
RIMKLB-210ENST00000541044 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
RIMKLB-210ENST00000541044 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
RIMKLB-210ENST00000541044 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
RIMKLB-210ENST00000541044 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
RIMKLB-210ENST00000541044 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
RIMKLB-210ENST00000541044 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
RIMKLB-210ENST00000541044 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
RIMKLB-210ENST00000541044 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
RIMKLB-210ENST00000541044 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
RIMKLB-210ENST00000541044 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
RIMKLB-210ENST00000541044 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
RIMKLB-210ENST00000541044 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
RIMKLB-210ENST00000541044 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
RIMKLB-210ENST00000541044 CUX2O14529 1486 aa14.29□□□□□ -0.12
RIMKLB-210ENST00000541044 NESP48681 1621 aa14.26□□□□□ -0.13
RIMKLB-210ENST00000541044 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
RIMKLB-210ENST00000541044 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
RIMKLB-210ENST00000541044 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
RIMKLB-210ENST00000541044 BAZ1BQ9UIG0 1483 aaKnown RBP14.13□□□□□ -0.15
RIMKLB-210ENST00000541044 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
RIMKLB-210ENST00000541044 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
RIMKLB-210ENST00000541044 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
RIMKLB-210ENST00000541044 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
RIMKLB-210ENST00000541044 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
RIMKLB-210ENST00000541044 PDS5BQ9NTI5 1447 aa13.95□□□□□ -0.18
RIMKLB-210ENST00000541044 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
RIMKLB-210ENST00000541044 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
RIMKLB-210ENST00000541044 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
RIMKLB-210ENST00000541044 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
RIMKLB-210ENST00000541044 WIZO95785 1651 aa13.85□□□□□ -0.19
RIMKLB-210ENST00000541044 WDR62O43379 1518 aa13.81□□□□□ -0.2
RIMKLB-210ENST00000541044 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.21
RIMKLB-210ENST00000541044 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
RIMKLB-210ENST00000541044 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
RIMKLB-210ENST00000541044 CFTRP13569 1480 aa13.71□□□□□ -0.21
RIMKLB-210ENST00000541044 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
RIMKLB-210ENST00000541044 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
RIMKLB-210ENST00000541044 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
RIMKLB-210ENST00000541044 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
RIMKLB-210ENST00000541044 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
RIMKLB-210ENST00000541044 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
RIMKLB-210ENST00000541044 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
RIMKLB-210ENST00000541044 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
RIMKLB-210ENST00000541044 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
RIMKLB-210ENST00000541044 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
RIMKLB-210ENST00000541044 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
RIMKLB-210ENST00000541044 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
RIMKLB-210ENST00000541044 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.26
RIMKLB-210ENST00000541044 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
RIMKLB-210ENST00000541044 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
RIMKLB-210ENST00000541044 FBLN2P98095 1184 aa13.39□□□□□ -0.27
RIMKLB-210ENST00000541044 PHF23Q9BUL5 403 aaPredicted RBP13.38□□□□□ -0.27
RIMKLB-210ENST00000541044 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
RIMKLB-210ENST00000541044 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
RIMKLB-210ENST00000541044 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
RIMKLB-210ENST00000541044 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
RIMKLB-210ENST00000541044 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
RIMKLB-210ENST00000541044 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
RIMKLB-210ENST00000541044 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
RIMKLB-210ENST00000541044 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
RIMKLB-210ENST00000541044 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
RIMKLB-210ENST00000541044 CHD1O14646 1710 aa13.29□□□□□ -0.28
RIMKLB-210ENST00000541044 SOGA1O94964 1423 aa13.29□□□□□ -0.28
RIMKLB-210ENST00000541044 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
RIMKLB-210ENST00000541044 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
RIMKLB-210ENST00000541044 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
RIMKLB-210ENST00000541044 CUX1P39880 1505 aa13.21□□□□□ -0.29
RIMKLB-210ENST00000541044 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
RIMKLB-210ENST00000541044 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
RIMKLB-210ENST00000541044 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
RIMKLB-210ENST00000541044 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
RIMKLB-210ENST00000541044 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
RIMKLB-210ENST00000541044 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
RIMKLB-210ENST00000541044 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
RIMKLB-210ENST00000541044 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
RIMKLB-210ENST00000541044 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
RIMKLB-210ENST00000541044 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
RIMKLB-210ENST00000541044 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
RIMKLB-210ENST00000541044 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
RIMKLB-210ENST00000541044 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
RIMKLB-210ENST00000541044 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
RIMKLB-210ENST00000541044 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
RIMKLB-210ENST00000541044 NUP160Q12769 1436 aa12.96□□□□□ -0.34
RIMKLB-210ENST00000541044 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
RIMKLB-210ENST00000541044 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
RIMKLB-210ENST00000541044 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
RIMKLB-210ENST00000541044 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
RIMKLB-210ENST00000541044 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
RIMKLB-210ENST00000541044 JPH4Q96JJ6 628 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms