RNA–Protein interactions for RNA: ENST00000540817.1

PREPL-215, Transcript of prolyl endopeptidase like, humanhuman

TSL 4

Gene PREPL, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREPL-215ENST00000540817 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
PREPL-215ENST00000540817 ABCC9O60706 1549 aa30.08■■■□□ 2.41
PREPL-215ENST00000540817 CCDC180Q9P1Z9 1646 aa29.81■■■□□ 2.36
PREPL-215ENST00000540817 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
PREPL-215ENST00000540817 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
PREPL-215ENST00000540817 NACADO15069 1562 aa28.24■■■□□ 2.11
PREPL-215ENST00000540817 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
PREPL-215ENST00000540817 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
PREPL-215ENST00000540817 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
PREPL-215ENST00000540817 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
PREPL-215ENST00000540817 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
PREPL-215ENST00000540817 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
PREPL-215ENST00000540817 SHROOM4Q9ULL8 1493 aa27.3■■□□□ 1.96
PREPL-215ENST00000540817 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
PREPL-215ENST00000540817 CC2D2AQ9P2K1 1620 aa27.18■■□□□ 1.94
PREPL-215ENST00000540817 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
PREPL-215ENST00000540817 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
PREPL-215ENST00000540817 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
PREPL-215ENST00000540817 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
PREPL-215ENST00000540817 CUX2O14529 1486 aa26.07■■□□□ 1.76
PREPL-215ENST00000540817 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
PREPL-215ENST00000540817 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
PREPL-215ENST00000540817 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
PREPL-215ENST00000540817 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
PREPL-215ENST00000540817 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
PREPL-215ENST00000540817 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
PREPL-215ENST00000540817 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
PREPL-215ENST00000540817 NESP48681 1621 aa25.77■■□□□ 1.72
PREPL-215ENST00000540817 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
PREPL-215ENST00000540817 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
PREPL-215ENST00000540817 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
PREPL-215ENST00000540817 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
PREPL-215ENST00000540817 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
PREPL-215ENST00000540817 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
PREPL-215ENST00000540817 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
PREPL-215ENST00000540817 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
PREPL-215ENST00000540817 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
PREPL-215ENST00000540817 MRC2Q9UBG0 1479 aa25.2■■□□□ 1.62
PREPL-215ENST00000540817 WDR62O43379 1518 aa25.16■■□□□ 1.62
PREPL-215ENST00000540817 WIZO95785 1651 aa25.15■■□□□ 1.62
PREPL-215ENST00000540817 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
PREPL-215ENST00000540817 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
PREPL-215ENST00000540817 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
PREPL-215ENST00000540817 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
PREPL-215ENST00000540817 CFTRP13569 1480 aa24.91■■□□□ 1.58
PREPL-215ENST00000540817 RSF1Q96T23 1441 aaPredicted RBP24.81■■□□□ 1.56
PREPL-215ENST00000540817 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
PREPL-215ENST00000540817 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
PREPL-215ENST00000540817 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
PREPL-215ENST00000540817 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
PREPL-215ENST00000540817 RIMBP3CA6NJZ7 1639 aa24.55■■□□□ 1.52
PREPL-215ENST00000540817 RIMBP3BA6NNM3 1639 aa24.55■■□□□ 1.52
PREPL-215ENST00000540817 RIMBP3Q9UFD9 1639 aa24.55■■□□□ 1.52
PREPL-215ENST00000540817 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
PREPL-215ENST00000540817 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
PREPL-215ENST00000540817 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
PREPL-215ENST00000540817 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
PREPL-215ENST00000540817 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
PREPL-215ENST00000540817 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
PREPL-215ENST00000540817 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
PREPL-215ENST00000540817 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
PREPL-215ENST00000540817 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
PREPL-215ENST00000540817 CHD1O14646 1710 aa24.29■■□□□ 1.48
PREPL-215ENST00000540817 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
PREPL-215ENST00000540817 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
PREPL-215ENST00000540817 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
PREPL-215ENST00000540817 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
PREPL-215ENST00000540817 FBLN2P98095 1184 aa24.12■■□□□ 1.45
PREPL-215ENST00000540817 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
PREPL-215ENST00000540817 SOGA1O94964 1423 aa24.06■■□□□ 1.44
PREPL-215ENST00000540817 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
PREPL-215ENST00000540817 TRHP20396 242 aaPredicted RBP24.04■■□□□ 1.44
PREPL-215ENST00000540817 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
PREPL-215ENST00000540817 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
PREPL-215ENST00000540817 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
PREPL-215ENST00000540817 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
PREPL-215ENST00000540817 CUX1P39880 1505 aa23.94■■□□□ 1.42
PREPL-215ENST00000540817 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
PREPL-215ENST00000540817 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
PREPL-215ENST00000540817 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
PREPL-215ENST00000540817 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
PREPL-215ENST00000540817 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
PREPL-215ENST00000540817 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
PREPL-215ENST00000540817 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
PREPL-215ENST00000540817 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
PREPL-215ENST00000540817 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
PREPL-215ENST00000540817 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
PREPL-215ENST00000540817 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
PREPL-215ENST00000540817 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
PREPL-215ENST00000540817 NUP160Q12769 1436 aa23.55■■□□□ 1.36
PREPL-215ENST00000540817 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
PREPL-215ENST00000540817 WRNQ14191 1432 aaPredicted RBP eCLIP23.53■■□□□ 1.36
PREPL-215ENST00000540817 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
PREPL-215ENST00000540817 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
PREPL-215ENST00000540817 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
PREPL-215ENST00000540817 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
PREPL-215ENST00000540817 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
PREPL-215ENST00000540817 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
PREPL-215ENST00000540817 KIF13AQ9H1H9 1805 aa23.36■■□□□ 1.33
PREPL-215ENST00000540817 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms