RNA–Protein interactions for RNA: ENST00000540808.2

PRR4-207, Transcript of proline rich 4, humanhuman

TSL 3

Gene PRR4, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR4-207ENST00000540808 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
PRR4-207ENST00000540808 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
PRR4-207ENST00000540808 CHIC1Q5VXU3 224 aa10.43□□□□□ -0.74
PRR4-207ENST00000540808 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
PRR4-207ENST00000540808 ABCC9O60706 1549 aa10.02□□□□□ -0.81
PRR4-207ENST00000540808 RB1CC1Q8TDY2 1594 aa9.55□□□□□ -0.88
PRR4-207ENST00000540808 NACADO15069 1562 aa9.5□□□□□ -0.89
PRR4-207ENST00000540808 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
PRR4-207ENST00000540808 UNC13AQ9UPW8 1703 aa9.42□□□□□ -0.9
PRR4-207ENST00000540808 MYO15BQ96JP2 1530 aa9.39□□□□□ -0.91
PRR4-207ENST00000540808 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
PRR4-207ENST00000540808 ZCCHC6Q5VYS8 1495 aaKnown RBP9.35□□□□□ -0.91
PRR4-207ENST00000540808 PHF23Q9BUL5 403 aaPredicted RBP9.34□□□□□ -0.91
PRR4-207ENST00000540808 BICRAQ9NZM4 1560 aa9.33□□□□□ -0.92
PRR4-207ENST00000540808 PABPN1Q86U42 306 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRR4-207ENST00000540808 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
PRR4-207ENST00000540808 SCRIBQ14160 1630 aa9.2□□□□□ -0.94
PRR4-207ENST00000540808 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
PRR4-207ENST00000540808 CC2D2AQ9P2K1 1620 aa9.06□□□□□ -0.96
PRR4-207ENST00000540808 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
PRR4-207ENST00000540808 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
PRR4-207ENST00000540808 SMARCA4P51532 1647 aa8.79□□□□□ -1
PRR4-207ENST00000540808 NCAPD3P42695 1498 aa8.77□□□□□ -1
PRR4-207ENST00000540808 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
PRR4-207ENST00000540808 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
PRR4-207ENST00000540808 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
PRR4-207ENST00000540808 HMGXB3Q12766 1538 aa8.72□□□□□ -1.01
PRR4-207ENST00000540808 MROH2BQ7Z745 1585 aa8.7□□□□□ -1.02
PRR4-207ENST00000540808 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
PRR4-207ENST00000540808 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
PRR4-207ENST00000540808 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
PRR4-207ENST00000540808 NESP48681 1621 aa8.65□□□□□ -1.03
PRR4-207ENST00000540808 ERCC6Q03468 1493 aa8.61□□□□□ -1.03
PRR4-207ENST00000540808 WIZO95785 1651 aa8.61□□□□□ -1.03
PRR4-207ENST00000540808 CUX2O14529 1486 aa8.58□□□□□ -1.04
PRR4-207ENST00000540808 LAMC3Q9Y6N6 1575 aa8.56□□□□□ -1.04
PRR4-207ENST00000540808 THOC2Q8NI27 1593 aaKnown RBP8.55□□□□□ -1.04
PRR4-207ENST00000540808 KIF21AQ7Z4S6 1674 aa8.55□□□□□ -1.04
PRR4-207ENST00000540808 RSF1Q96T23 1441 aaPredicted RBP8.52□□□□□ -1.05
PRR4-207ENST00000540808 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
PRR4-207ENST00000540808 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
PRR4-207ENST00000540808 PLPPR3Q6T4P5 718 aa8.49□□□□□ -1.05
PRR4-207ENST00000540808 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
PRR4-207ENST00000540808 PDS5BQ9NTI5 1447 aa8.47□□□□□ -1.05
PRR4-207ENST00000540808 MRC2Q9UBG0 1479 aa8.44□□□□□ -1.06
PRR4-207ENST00000540808 WDR62O43379 1518 aa8.43□□□□□ -1.06
PRR4-207ENST00000540808 CFTRP13569 1480 aa8.42□□□□□ -1.06
PRR4-207ENST00000540808 FANCD2Q9BXW9 1451 aa8.41□□□□□ -1.06
PRR4-207ENST00000540808 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
PRR4-207ENST00000540808 PRDM2Q13029 1718 aa8.4□□□□□ -1.07
PRR4-207ENST00000540808 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
PRR4-207ENST00000540808 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
PRR4-207ENST00000540808 TOPBP1Q92547 1522 aa8.27□□□□□ -1.09
PRR4-207ENST00000540808 ZNF608Q9ULD9 1512 aaPredicted RBP8.25□□□□□ -1.09
PRR4-207ENST00000540808 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
PRR4-207ENST00000540808 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
PRR4-207ENST00000540808 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.09
PRR4-207ENST00000540808 EIF4G3O43432 1585 aaKnown RBP8.21□□□□□ -1.1
PRR4-207ENST00000540808 ABCC8Q09428 1581 aa8.21□□□□□ -1.1
PRR4-207ENST00000540808 POLA1P09884 1462 aaPredicted RBP8.19□□□□□ -1.1
PRR4-207ENST00000540808 FOXD1Q16676 465 aa8.18□□□□□ -1.1
PRR4-207ENST00000540808 OSCARQ8IYS5 282 aa8.17□□□□□ -1.1
PRR4-207ENST00000540808 CUX1P39880 1505 aa8.17□□□□□ -1.1
PRR4-207ENST00000540808 CHD1O14646 1710 aa8.16□□□□□ -1.1
PRR4-207ENST00000540808 AQRO60306 1485 aaKnown RBP eCLIP8.16□□□□□ -1.1
PRR4-207ENST00000540808 ADRA2BP18089 450 aa8.16□□□□□ -1.1
PRR4-207ENST00000540808 PPP6R1Q9UPN7 881 aa8.16□□□□□ -1.1
PRR4-207ENST00000540808 RAD54L2Q9Y4B4 1467 aa8.16□□□□□ -1.1
PRR4-207ENST00000540808 SUPT5HO00267 1087 aaKnown RBP8.15□□□□□ -1.1
PRR4-207ENST00000540808 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
PRR4-207ENST00000540808 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
PRR4-207ENST00000540808 RIMBP3CA6NJZ7 1639 aa8.13□□□□□ -1.11
PRR4-207ENST00000540808 RIMBP3BA6NNM3 1639 aa8.13□□□□□ -1.11
PRR4-207ENST00000540808 RIMBP3Q9UFD9 1639 aa8.13□□□□□ -1.11
PRR4-207ENST00000540808 SOGA1O94964 1423 aa8.12□□□□□ -1.11
PRR4-207ENST00000540808 TDRD9Q8NDG6 1382 aaKnown RBP8.12□□□□□ -1.11
PRR4-207ENST00000540808 WDR97A6NE52 1622 aa8.12□□□□□ -1.11
PRR4-207ENST00000540808 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
PRR4-207ENST00000540808 SNAPC4Q5SXM2 1469 aa8.08□□□□□ -1.12
PRR4-207ENST00000540808 PBRM1Q86U86 1689 aa8.08□□□□□ -1.12
PRR4-207ENST00000540808 ABCA5Q8WWZ7 1642 aa8.07□□□□□ -1.12
PRR4-207ENST00000540808 BIVM-ERCC5R4GMW8 1640 aa8.06□□□□□ -1.12
PRR4-207ENST00000540808 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
PRR4-207ENST00000540808 SYNJ1O43426 1573 aa8.05□□□□□ -1.12
PRR4-207ENST00000540808 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
PRR4-207ENST00000540808 FBLN2P98095 1184 aa8.05□□□□□ -1.12
PRR4-207ENST00000540808 MAGI1Q96QZ7 1491 aaPredicted RBP8.05□□□□□ -1.12
PRR4-207ENST00000540808 CLASP1Q7Z460 1538 aa8.04□□□□□ -1.12
PRR4-207ENST00000540808 TOP2BQ02880 1626 aa8.04□□□□□ -1.12
PRR4-207ENST00000540808 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
PRR4-207ENST00000540808 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
PRR4-207ENST00000540808 SYNJ2O15056 1496 aa8.02□□□□□ -1.13
PRR4-207ENST00000540808 WRNQ14191 1432 aaPredicted RBP eCLIP8.02□□□□□ -1.13
PRR4-207ENST00000540808 ADAMTS12P58397 1594 aa7.99□□□□□ -1.13
PRR4-207ENST00000540808 CYB5RLQ6IPT4 315 aa7.99□□□□□ -1.13
PRR4-207ENST00000540808 CHMP7Q8WUX9 453 aaPredicted RBP7.99□□□□□ -1.13
PRR4-207ENST00000540808 GRIN2AQ12879 1464 aa7.96□□□□□ -1.13
PRR4-207ENST00000540808 CEP170Q5SW79 1584 aa7.96□□□□□ -1.14
PRR4-207ENST00000540808 ERCC6L2Q5T890 1561 aa7.95□□□□□ -1.14
PRR4-207ENST00000540808 ERICH3Q5RHP9 1530 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms