RNA–Protein interactions for RNA: ENST00000540634.2

ARMC6-213, Transcript of armadillo repeat containing 6, humanhuman

TSL 5

Gene ARMC6, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-213ENST00000540634 NISCHQ9Y2I1 1504 aa40.86■■■■■ 4.13
ARMC6-213ENST00000540634 ABCC9O60706 1549 aa36.73■■■■□ 3.47
ARMC6-213ENST00000540634 CCDC180Q9P1Z9 1646 aa36.53■■■■□ 3.44
ARMC6-213ENST00000540634 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
ARMC6-213ENST00000540634 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
ARMC6-213ENST00000540634 NACADO15069 1562 aa34.61■■■■□ 3.13
ARMC6-213ENST00000540634 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
ARMC6-213ENST00000540634 PABPN1Q86U42 306 aaKnown RBP eCLIP34.3■■■■□ 3.08
ARMC6-213ENST00000540634 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
ARMC6-213ENST00000540634 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
ARMC6-213ENST00000540634 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
ARMC6-213ENST00000540634 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
ARMC6-213ENST00000540634 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
ARMC6-213ENST00000540634 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
ARMC6-213ENST00000540634 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
ARMC6-213ENST00000540634 CC2D2AQ9P2K1 1620 aa33.08■■■□□ 2.89
ARMC6-213ENST00000540634 CECR2Q9BXF3 1484 aa33.06■■■□□ 2.88
ARMC6-213ENST00000540634 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
ARMC6-213ENST00000540634 AEBP2Q6ZN18 517 aaPredicted RBP32.21■■■□□ 2.75
ARMC6-213ENST00000540634 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
ARMC6-213ENST00000540634 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
ARMC6-213ENST00000540634 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
ARMC6-213ENST00000540634 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
ARMC6-213ENST00000540634 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
ARMC6-213ENST00000540634 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.66
ARMC6-213ENST00000540634 HMGXB3Q12766 1538 aa31.69■■■□□ 2.66
ARMC6-213ENST00000540634 DNAJC5Q9H3Z4 198 aa31.62■■■□□ 2.65
ARMC6-213ENST00000540634 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
ARMC6-213ENST00000540634 CUX2O14529 1486 aa31.54■■■□□ 2.64
ARMC6-213ENST00000540634 NESP48681 1621 aa31.54■■■□□ 2.64
ARMC6-213ENST00000540634 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
ARMC6-213ENST00000540634 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
ARMC6-213ENST00000540634 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
ARMC6-213ENST00000540634 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
ARMC6-213ENST00000540634 WIZO95785 1651 aa31.12■■■□□ 2.57
ARMC6-213ENST00000540634 THOC2Q8NI27 1593 aaKnown RBP31.08■■■□□ 2.57
ARMC6-213ENST00000540634 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
ARMC6-213ENST00000540634 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
ARMC6-213ENST00000540634 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
ARMC6-213ENST00000540634 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
ARMC6-213ENST00000540634 MRC2Q9UBG0 1479 aa30.83■■■□□ 2.53
ARMC6-213ENST00000540634 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
ARMC6-213ENST00000540634 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
ARMC6-213ENST00000540634 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
ARMC6-213ENST00000540634 WDR62O43379 1518 aa30.69■■■□□ 2.5
ARMC6-213ENST00000540634 CFTRP13569 1480 aa30.67■■■□□ 2.5
ARMC6-213ENST00000540634 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
ARMC6-213ENST00000540634 URB2Q14146 1524 aaKnown RBP30.43■■■□□ 2.46
ARMC6-213ENST00000540634 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
ARMC6-213ENST00000540634 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
ARMC6-213ENST00000540634 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
ARMC6-213ENST00000540634 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
ARMC6-213ENST00000540634 IFT140Q96RY7 1462 aa30.1■■■□□ 2.41
ARMC6-213ENST00000540634 ZNF608Q9ULD9 1512 aaPredicted RBP30.08■■■□□ 2.41
ARMC6-213ENST00000540634 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
ARMC6-213ENST00000540634 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
ARMC6-213ENST00000540634 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
ARMC6-213ENST00000540634 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
ARMC6-213ENST00000540634 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
ARMC6-213ENST00000540634 FBLN2P98095 1184 aa29.78■■■□□ 2.36
ARMC6-213ENST00000540634 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
ARMC6-213ENST00000540634 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
ARMC6-213ENST00000540634 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
ARMC6-213ENST00000540634 SOGA1O94964 1423 aa29.74■■■□□ 2.35
ARMC6-213ENST00000540634 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
ARMC6-213ENST00000540634 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
ARMC6-213ENST00000540634 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
ARMC6-213ENST00000540634 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
ARMC6-213ENST00000540634 ARHGEF11O15085 1522 aa29.65■■■□□ 2.34
ARMC6-213ENST00000540634 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.33
ARMC6-213ENST00000540634 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
ARMC6-213ENST00000540634 CHD1O14646 1710 aa29.59■■■□□ 2.33
ARMC6-213ENST00000540634 CUX1P39880 1505 aa29.59■■■□□ 2.33
ARMC6-213ENST00000540634 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.32
ARMC6-213ENST00000540634 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
ARMC6-213ENST00000540634 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
ARMC6-213ENST00000540634 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
ARMC6-213ENST00000540634 MAGI1Q96QZ7 1491 aaPredicted RBP29.38■■■□□ 2.29
ARMC6-213ENST00000540634 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
ARMC6-213ENST00000540634 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
ARMC6-213ENST00000540634 SYNJ2O15056 1496 aa29.3■■■□□ 2.28
ARMC6-213ENST00000540634 TRHP20396 242 aaPredicted RBP29.3■■■□□ 2.28
ARMC6-213ENST00000540634 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
ARMC6-213ENST00000540634 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
ARMC6-213ENST00000540634 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
ARMC6-213ENST00000540634 WRNQ14191 1432 aaPredicted RBP eCLIP29.21■■■□□ 2.27
ARMC6-213ENST00000540634 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
ARMC6-213ENST00000540634 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
ARMC6-213ENST00000540634 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
ARMC6-213ENST00000540634 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
ARMC6-213ENST00000540634 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
ARMC6-213ENST00000540634 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
ARMC6-213ENST00000540634 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
ARMC6-213ENST00000540634 NUP160Q12769 1436 aa28.91■■■□□ 2.22
ARMC6-213ENST00000540634 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
ARMC6-213ENST00000540634 ERICH3Q5RHP9 1530 aa28.88■■■□□ 2.21
ARMC6-213ENST00000540634 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
ARMC6-213ENST00000540634 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
ARMC6-213ENST00000540634 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
ARMC6-213ENST00000540634 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms