RNA–Protein interactions for RNA: ENST00000540506.2

C12orf57-204, Transcript of chromosome 12 open reading frame 57, humanhuman

TSL 2 BASIC

Gene C12orf57, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf57-204ENST00000540506 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
C12orf57-204ENST00000540506 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
C12orf57-204ENST00000540506 ABCC9O60706 1549 aa28.64■■■□□ 2.17
C12orf57-204ENST00000540506 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
C12orf57-204ENST00000540506 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
C12orf57-204ENST00000540506 NACADO15069 1562 aa27.56■■■□□ 2
C12orf57-204ENST00000540506 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
C12orf57-204ENST00000540506 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
C12orf57-204ENST00000540506 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
C12orf57-204ENST00000540506 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
C12orf57-204ENST00000540506 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
C12orf57-204ENST00000540506 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
C12orf57-204ENST00000540506 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
C12orf57-204ENST00000540506 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
C12orf57-204ENST00000540506 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
C12orf57-204ENST00000540506 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
C12orf57-204ENST00000540506 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
C12orf57-204ENST00000540506 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
C12orf57-204ENST00000540506 SMARCA4P51532 1647 aa25.72■■□□□ 1.71
C12orf57-204ENST00000540506 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
C12orf57-204ENST00000540506 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
C12orf57-204ENST00000540506 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
C12orf57-204ENST00000540506 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
C12orf57-204ENST00000540506 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
C12orf57-204ENST00000540506 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
C12orf57-204ENST00000540506 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
C12orf57-204ENST00000540506 WIZO95785 1651 aa25.32■■□□□ 1.64
C12orf57-204ENST00000540506 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
C12orf57-204ENST00000540506 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
C12orf57-204ENST00000540506 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
C12orf57-204ENST00000540506 NESP48681 1621 aa24.87■■□□□ 1.57
C12orf57-204ENST00000540506 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
C12orf57-204ENST00000540506 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
C12orf57-204ENST00000540506 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
C12orf57-204ENST00000540506 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
C12orf57-204ENST00000540506 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
C12orf57-204ENST00000540506 CFTRP13569 1480 aa24.58■■□□□ 1.52
C12orf57-204ENST00000540506 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
C12orf57-204ENST00000540506 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
C12orf57-204ENST00000540506 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
C12orf57-204ENST00000540506 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
C12orf57-204ENST00000540506 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
C12orf57-204ENST00000540506 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
C12orf57-204ENST00000540506 CUX2O14529 1486 aa24.34■■□□□ 1.49
C12orf57-204ENST00000540506 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
C12orf57-204ENST00000540506 WDR62O43379 1518 aa24.3■■□□□ 1.48
C12orf57-204ENST00000540506 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
C12orf57-204ENST00000540506 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
C12orf57-204ENST00000540506 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
C12orf57-204ENST00000540506 CUX1P39880 1505 aa23.98■■□□□ 1.43
C12orf57-204ENST00000540506 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
C12orf57-204ENST00000540506 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
C12orf57-204ENST00000540506 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
C12orf57-204ENST00000540506 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
C12orf57-204ENST00000540506 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
C12orf57-204ENST00000540506 IFT140Q96RY7 1462 aa23.83■■□□□ 1.41
C12orf57-204ENST00000540506 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
C12orf57-204ENST00000540506 ZNF608Q9ULD9 1512 aaPredicted RBP23.81■■□□□ 1.4
C12orf57-204ENST00000540506 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
C12orf57-204ENST00000540506 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
C12orf57-204ENST00000540506 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
C12orf57-204ENST00000540506 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
C12orf57-204ENST00000540506 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
C12orf57-204ENST00000540506 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
C12orf57-204ENST00000540506 SOGA1O94964 1423 aa23.67■■□□□ 1.38
C12orf57-204ENST00000540506 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.371e-13■■■■□ 24.4
C12orf57-204ENST00000540506 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
C12orf57-204ENST00000540506 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
C12orf57-204ENST00000540506 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
C12orf57-204ENST00000540506 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
C12orf57-204ENST00000540506 CHD1O14646 1710 aa23.47■■□□□ 1.35
C12orf57-204ENST00000540506 GAPVD1Q14C86 1478 aa23.45■■□□□ 1.34
C12orf57-204ENST00000540506 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
C12orf57-204ENST00000540506 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
C12orf57-204ENST00000540506 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
C12orf57-204ENST00000540506 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
C12orf57-204ENST00000540506 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
C12orf57-204ENST00000540506 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
C12orf57-204ENST00000540506 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
C12orf57-204ENST00000540506 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
C12orf57-204ENST00000540506 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
C12orf57-204ENST00000540506 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
C12orf57-204ENST00000540506 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
C12orf57-204ENST00000540506 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
C12orf57-204ENST00000540506 FBLN2P98095 1184 aa23.15■■□□□ 1.3
C12orf57-204ENST00000540506 CUL7Q14999 1698 aa23.14■■□□□ 1.29
C12orf57-204ENST00000540506 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
C12orf57-204ENST00000540506 IGF1RP08069 1367 aa23.12■■□□□ 1.29
C12orf57-204ENST00000540506 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
C12orf57-204ENST00000540506 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
C12orf57-204ENST00000540506 NUP160Q12769 1436 aa23.08■■□□□ 1.28
C12orf57-204ENST00000540506 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
C12orf57-204ENST00000540506 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
C12orf57-204ENST00000540506 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
C12orf57-204ENST00000540506 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
C12orf57-204ENST00000540506 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
C12orf57-204ENST00000540506 CARMIL1Q5VZK9 1371 aa22.96■■□□□ 1.27
C12orf57-204ENST00000540506 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
C12orf57-204ENST00000540506 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
C12orf57-204ENST00000540506 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms