RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
SSPN-207ENST00000540266 ABCC9O60706 1549 aa25.32■■□□□ 1.64
SSPN-207ENST00000540266 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
SSPN-207ENST00000540266 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
SSPN-207ENST00000540266 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
SSPN-207ENST00000540266 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
SSPN-207ENST00000540266 NACADO15069 1562 aa23.4■■□□□ 1.34
SSPN-207ENST00000540266 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
SSPN-207ENST00000540266 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
SSPN-207ENST00000540266 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
SSPN-207ENST00000540266 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
SSPN-207ENST00000540266 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
SSPN-207ENST00000540266 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
SSPN-207ENST00000540266 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
SSPN-207ENST00000540266 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
SSPN-207ENST00000540266 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.2
SSPN-207ENST00000540266 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
SSPN-207ENST00000540266 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
SSPN-207ENST00000540266 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
SSPN-207ENST00000540266 CUX2O14529 1486 aa22.17■■□□□ 1.14
SSPN-207ENST00000540266 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
SSPN-207ENST00000540266 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
SSPN-207ENST00000540266 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
SSPN-207ENST00000540266 NESP48681 1621 aa21.55■■□□□ 1.04
SSPN-207ENST00000540266 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
SSPN-207ENST00000540266 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
SSPN-207ENST00000540266 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
SSPN-207ENST00000540266 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
SSPN-207ENST00000540266 SMARCA2P51531 1590 aa21.31■■□□□ 1
SSPN-207ENST00000540266 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
SSPN-207ENST00000540266 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
SSPN-207ENST00000540266 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
SSPN-207ENST00000540266 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
SSPN-207ENST00000540266 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
SSPN-207ENST00000540266 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
SSPN-207ENST00000540266 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
SSPN-207ENST00000540266 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
SSPN-207ENST00000540266 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
SSPN-207ENST00000540266 WDR62O43379 1518 aa20.99■□□□□ 0.95
SSPN-207ENST00000540266 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
SSPN-207ENST00000540266 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
SSPN-207ENST00000540266 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
SSPN-207ENST00000540266 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
SSPN-207ENST00000540266 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
SSPN-207ENST00000540266 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
SSPN-207ENST00000540266 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
SSPN-207ENST00000540266 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
SSPN-207ENST00000540266 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
SSPN-207ENST00000540266 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
SSPN-207ENST00000540266 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
SSPN-207ENST00000540266 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
SSPN-207ENST00000540266 CFTRP13569 1480 aa20.59■□□□□ 0.89
SSPN-207ENST00000540266 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
SSPN-207ENST00000540266 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
SSPN-207ENST00000540266 WIZO95785 1651 aa20.42■□□□□ 0.86
SSPN-207ENST00000540266 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
SSPN-207ENST00000540266 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
SSPN-207ENST00000540266 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.83
SSPN-207ENST00000540266 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
SSPN-207ENST00000540266 FBLN2P98095 1184 aa20.2■□□□□ 0.82
SSPN-207ENST00000540266 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
SSPN-207ENST00000540266 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.81
SSPN-207ENST00000540266 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
SSPN-207ENST00000540266 CHD1O14646 1710 aa20.11■□□□□ 0.81
SSPN-207ENST00000540266 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
SSPN-207ENST00000540266 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
SSPN-207ENST00000540266 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
SSPN-207ENST00000540266 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
SSPN-207ENST00000540266 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
SSPN-207ENST00000540266 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
SSPN-207ENST00000540266 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
SSPN-207ENST00000540266 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
SSPN-207ENST00000540266 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
SSPN-207ENST00000540266 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
SSPN-207ENST00000540266 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
SSPN-207ENST00000540266 SOGA1O94964 1423 aa19.89■□□□□ 0.77
SSPN-207ENST00000540266 ILDR1Q86SU0 546 aaPredicted RBP19.89■□□□□ 0.77
SSPN-207ENST00000540266 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
SSPN-207ENST00000540266 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
SSPN-207ENST00000540266 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
SSPN-207ENST00000540266 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
SSPN-207ENST00000540266 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
SSPN-207ENST00000540266 KDM4FA0A1W2PPD8 638 aa19.71■□□□□ 0.75
SSPN-207ENST00000540266 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
SSPN-207ENST00000540266 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
SSPN-207ENST00000540266 CUX1P39880 1505 aa19.58■□□□□ 0.73
SSPN-207ENST00000540266 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
SSPN-207ENST00000540266 NUP160Q12769 1436 aa19.54■□□□□ 0.72
SSPN-207ENST00000540266 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
SSPN-207ENST00000540266 KIF13AQ9H1H9 1805 aa19.52■□□□□ 0.72
SSPN-207ENST00000540266 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
SSPN-207ENST00000540266 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
SSPN-207ENST00000540266 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
SSPN-207ENST00000540266 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
SSPN-207ENST00000540266 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SSPN-207ENST00000540266 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
SSPN-207ENST00000540266 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.69
SSPN-207ENST00000540266 JPH4Q96JJ6 628 aa19.38■□□□□ 0.69
SSPN-207ENST00000540266 MAPKBP1O60336 1514 aa19.36■□□□□ 0.69
SSPN-207ENST00000540266 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms