RNA–Protein interactions for RNA: ENST00000539932.5

SLC11A1-218, Transcript of solute carrier family 11 member 1, humanhuman

TSL 1 (best)

Gene SLC11A1, Length 1,765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-218ENST00000539932 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.35
SLC11A1-218ENST00000539932 CCDC180Q9P1Z9 1646 aa37.15■■■■□ 3.54
SLC11A1-218ENST00000539932 ABCC9O60706 1549 aa35.51■■■■□ 3.28
SLC11A1-218ENST00000539932 ZCCHC6Q5VYS8 1495 aaKnown RBP35.42■■■■□ 3.26
SLC11A1-218ENST00000539932 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
SLC11A1-218ENST00000539932 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
SLC11A1-218ENST00000539932 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
SLC11A1-218ENST00000539932 NACADO15069 1562 aa34.64■■■■□ 3.14
SLC11A1-218ENST00000539932 RB1CC1Q8TDY2 1594 aa34.48■■■■□ 3.11
SLC11A1-218ENST00000539932 SHROOM4Q9ULL8 1493 aa34.16■■■■□ 3.06
SLC11A1-218ENST00000539932 SCRIBQ14160 1630 aa34.11■■■■□ 3.05
SLC11A1-218ENST00000539932 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
SLC11A1-218ENST00000539932 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
SLC11A1-218ENST00000539932 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
SLC11A1-218ENST00000539932 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
SLC11A1-218ENST00000539932 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
SLC11A1-218ENST00000539932 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
SLC11A1-218ENST00000539932 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
SLC11A1-218ENST00000539932 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
SLC11A1-218ENST00000539932 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
SLC11A1-218ENST00000539932 EIF4G1Q04637 1599 aaKnown RBP32.5■■■□□ 2.79
SLC11A1-218ENST00000539932 WIZO95785 1651 aa32.42■■■□□ 2.78
SLC11A1-218ENST00000539932 PEG3Q9GZU2 1588 aa32.23■■■□□ 2.75
SLC11A1-218ENST00000539932 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
SLC11A1-218ENST00000539932 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
SLC11A1-218ENST00000539932 SMARCA2P51531 1590 aa32.14■■■□□ 2.74
SLC11A1-218ENST00000539932 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
SLC11A1-218ENST00000539932 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
SLC11A1-218ENST00000539932 NCAPD3P42695 1498 aa31.93■■■□□ 2.7
SLC11A1-218ENST00000539932 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
SLC11A1-218ENST00000539932 DNAJC5BQ9UF47 199 aa31.69■■■□□ 2.66
SLC11A1-218ENST00000539932 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
SLC11A1-218ENST00000539932 CFTRP13569 1480 aa31.11■■■□□ 2.57
SLC11A1-218ENST00000539932 PRDM2Q13029 1718 aa31.1■■■□□ 2.57
SLC11A1-218ENST00000539932 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
SLC11A1-218ENST00000539932 NESP48681 1621 aa31.05■■■□□ 2.56
SLC11A1-218ENST00000539932 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
SLC11A1-218ENST00000539932 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
SLC11A1-218ENST00000539932 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
SLC11A1-218ENST00000539932 FANCD2Q9BXW9 1451 aa30.78■■■□□ 2.52
SLC11A1-218ENST00000539932 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
SLC11A1-218ENST00000539932 PDS5BQ9NTI5 1447 aa30.69■■■□□ 2.5
SLC11A1-218ENST00000539932 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
SLC11A1-218ENST00000539932 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
SLC11A1-218ENST00000539932 CEP164Q9UPV0 1460 aa30.64■■■□□ 2.5
SLC11A1-218ENST00000539932 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
SLC11A1-218ENST00000539932 CUX1P39880 1505 aa30.57■■■□□ 2.48
SLC11A1-218ENST00000539932 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
SLC11A1-218ENST00000539932 TOP2BQ02880 1626 aa30.54■■■□□ 2.48
SLC11A1-218ENST00000539932 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
SLC11A1-218ENST00000539932 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.46
SLC11A1-218ENST00000539932 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.46
SLC11A1-218ENST00000539932 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
SLC11A1-218ENST00000539932 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
SLC11A1-218ENST00000539932 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
SLC11A1-218ENST00000539932 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
SLC11A1-218ENST00000539932 WDR62O43379 1518 aa30.26■■■□□ 2.43
SLC11A1-218ENST00000539932 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
SLC11A1-218ENST00000539932 SOGA1O94964 1423 aa30.16■■■□□ 2.42
SLC11A1-218ENST00000539932 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
SLC11A1-218ENST00000539932 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
SLC11A1-218ENST00000539932 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
SLC11A1-218ENST00000539932 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
SLC11A1-218ENST00000539932 CUX2O14529 1486 aa30.03■■■□□ 2.4
SLC11A1-218ENST00000539932 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
SLC11A1-218ENST00000539932 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
SLC11A1-218ENST00000539932 EEA1Q15075 1411 aa29.94■■■□□ 2.38
SLC11A1-218ENST00000539932 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
SLC11A1-218ENST00000539932 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
SLC11A1-218ENST00000539932 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
SLC11A1-218ENST00000539932 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
SLC11A1-218ENST00000539932 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
SLC11A1-218ENST00000539932 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
SLC11A1-218ENST00000539932 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
SLC11A1-218ENST00000539932 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
SLC11A1-218ENST00000539932 GAPVD1Q14C86 1478 aa29.75■■■□□ 2.35
SLC11A1-218ENST00000539932 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
SLC11A1-218ENST00000539932 EHMT2Q96KQ7 1210 aa29.74■■■□□ 2.35
SLC11A1-218ENST00000539932 LOC105371045A0A1W2PR82 267 aa29.72■■■□□ 2.35
SLC11A1-218ENST00000539932 IGF1RP08069 1367 aa29.69■■■□□ 2.34
SLC11A1-218ENST00000539932 KIF21BO75037 1637 aa29.68■■■□□ 2.34
SLC11A1-218ENST00000539932 ERICH3Q5RHP9 1530 aa29.65■■■□□ 2.34
SLC11A1-218ENST00000539932 CUL7Q14999 1698 aa29.62■■■□□ 2.33
SLC11A1-218ENST00000539932 PRXQ9BXM0 1461 aa29.62■■■□□ 2.33
SLC11A1-218ENST00000539932 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
SLC11A1-218ENST00000539932 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
SLC11A1-218ENST00000539932 GOLGA3Q08378 1498 aa29.56■■■□□ 2.32
SLC11A1-218ENST00000539932 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
SLC11A1-218ENST00000539932 ADAMTS12P58397 1594 aa29.51■■■□□ 2.31
SLC11A1-218ENST00000539932 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
SLC11A1-218ENST00000539932 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
SLC11A1-218ENST00000539932 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
SLC11A1-218ENST00000539932 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
SLC11A1-218ENST00000539932 TNIKQ9UKE5 1360 aa29.33■■■□□ 2.29
SLC11A1-218ENST00000539932 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
SLC11A1-218ENST00000539932 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
SLC11A1-218ENST00000539932 CHD1O14646 1710 aa29.25■■■□□ 2.27
SLC11A1-218ENST00000539932 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
SLC11A1-218ENST00000539932 FBLN2P98095 1184 aa29.2■■■□□ 2.26
SLC11A1-218ENST00000539932 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms