RNA–Protein interactions for RNA: ENST00000539928.1

PHC1-207, Transcript of polyhomeotic homolog 1, humanhuman

TSL 4

Gene PHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-207ENST00000539928 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
PHC1-207ENST00000539928 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
PHC1-207ENST00000539928 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
PHC1-207ENST00000539928 ABCC9O60706 1549 aa20.43■□□□□ 0.86
PHC1-207ENST00000539928 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
PHC1-207ENST00000539928 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
PHC1-207ENST00000539928 NACADO15069 1562 aa19.34■□□□□ 0.69
PHC1-207ENST00000539928 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
PHC1-207ENST00000539928 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
PHC1-207ENST00000539928 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
PHC1-207ENST00000539928 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
PHC1-207ENST00000539928 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
PHC1-207ENST00000539928 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
PHC1-207ENST00000539928 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
PHC1-207ENST00000539928 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
PHC1-207ENST00000539928 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
PHC1-207ENST00000539928 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
PHC1-207ENST00000539928 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
PHC1-207ENST00000539928 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
PHC1-207ENST00000539928 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
PHC1-207ENST00000539928 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
PHC1-207ENST00000539928 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
PHC1-207ENST00000539928 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
PHC1-207ENST00000539928 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
PHC1-207ENST00000539928 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
PHC1-207ENST00000539928 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PHC1-207ENST00000539928 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
PHC1-207ENST00000539928 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
PHC1-207ENST00000539928 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
PHC1-207ENST00000539928 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
PHC1-207ENST00000539928 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
PHC1-207ENST00000539928 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
PHC1-207ENST00000539928 NESP48681 1621 aa17.58■□□□□ 0.4
PHC1-207ENST00000539928 CUX2O14529 1486 aa17.53■□□□□ 0.4
PHC1-207ENST00000539928 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
PHC1-207ENST00000539928 WIZO95785 1651 aa17.44■□□□□ 0.38
PHC1-207ENST00000539928 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
PHC1-207ENST00000539928 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
PHC1-207ENST00000539928 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
PHC1-207ENST00000539928 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
PHC1-207ENST00000539928 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
PHC1-207ENST00000539928 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
PHC1-207ENST00000539928 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
PHC1-207ENST00000539928 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
PHC1-207ENST00000539928 CFTRP13569 1480 aa17.14■□□□□ 0.33
PHC1-207ENST00000539928 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
PHC1-207ENST00000539928 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
PHC1-207ENST00000539928 WDR62O43379 1518 aa17.13■□□□□ 0.33
PHC1-207ENST00000539928 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
PHC1-207ENST00000539928 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
PHC1-207ENST00000539928 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PHC1-207ENST00000539928 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
PHC1-207ENST00000539928 FOXD1Q16676 465 aa16.82■□□□□ 0.28
PHC1-207ENST00000539928 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
PHC1-207ENST00000539928 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
PHC1-207ENST00000539928 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
PHC1-207ENST00000539928 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
PHC1-207ENST00000539928 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PHC1-207ENST00000539928 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
PHC1-207ENST00000539928 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
PHC1-207ENST00000539928 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
PHC1-207ENST00000539928 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
PHC1-207ENST00000539928 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
PHC1-207ENST00000539928 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
PHC1-207ENST00000539928 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
PHC1-207ENST00000539928 SOGA1O94964 1423 aa16.59■□□□□ 0.25
PHC1-207ENST00000539928 CUX1P39880 1505 aa16.57■□□□□ 0.24
PHC1-207ENST00000539928 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
PHC1-207ENST00000539928 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
PHC1-207ENST00000539928 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
PHC1-207ENST00000539928 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
PHC1-207ENST00000539928 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
PHC1-207ENST00000539928 CHD1O14646 1710 aa16.53■□□□□ 0.24
PHC1-207ENST00000539928 FBLN2P98095 1184 aa16.53■□□□□ 0.24
PHC1-207ENST00000539928 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
PHC1-207ENST00000539928 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
PHC1-207ENST00000539928 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
PHC1-207ENST00000539928 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
PHC1-207ENST00000539928 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
PHC1-207ENST00000539928 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
PHC1-207ENST00000539928 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
PHC1-207ENST00000539928 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
PHC1-207ENST00000539928 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
PHC1-207ENST00000539928 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
PHC1-207ENST00000539928 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
PHC1-207ENST00000539928 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
PHC1-207ENST00000539928 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
PHC1-207ENST00000539928 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
PHC1-207ENST00000539928 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
PHC1-207ENST00000539928 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
PHC1-207ENST00000539928 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
PHC1-207ENST00000539928 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
PHC1-207ENST00000539928 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
PHC1-207ENST00000539928 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
PHC1-207ENST00000539928 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
PHC1-207ENST00000539928 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
PHC1-207ENST00000539928 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
PHC1-207ENST00000539928 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
PHC1-207ENST00000539928 NUP160Q12769 1436 aa16.15■□□□□ 0.18
PHC1-207ENST00000539928 CEP170Q5SW79 1584 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms