RNA–Protein interactions for RNA: ENST00000539859.1

LRTM2-203, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-203ENST00000539859 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
LRTM2-203ENST00000539859 ABCC9O60706 1549 aa34.99■■■■□ 3.19
LRTM2-203ENST00000539859 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
LRTM2-203ENST00000539859 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.95
LRTM2-203ENST00000539859 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
LRTM2-203ENST00000539859 NACADO15069 1562 aa32.45■■■□□ 2.78
LRTM2-203ENST00000539859 PABPN1Q86U42 306 aaKnown RBP eCLIP32.38■■■□□ 2.77
LRTM2-203ENST00000539859 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
LRTM2-203ENST00000539859 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
LRTM2-203ENST00000539859 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
LRTM2-203ENST00000539859 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
LRTM2-203ENST00000539859 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
LRTM2-203ENST00000539859 CC2D2AQ9P2K1 1620 aa31.55■■■□□ 2.64
LRTM2-203ENST00000539859 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
LRTM2-203ENST00000539859 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
LRTM2-203ENST00000539859 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.6
LRTM2-203ENST00000539859 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
LRTM2-203ENST00000539859 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
LRTM2-203ENST00000539859 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
LRTM2-203ENST00000539859 CUX2O14529 1486 aa30.57■■■□□ 2.48
LRTM2-203ENST00000539859 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
LRTM2-203ENST00000539859 NCAPD3P42695 1498 aa29.92■■■□□ 2.38
LRTM2-203ENST00000539859 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
LRTM2-203ENST00000539859 NESP48681 1621 aa29.75■■■□□ 2.35
LRTM2-203ENST00000539859 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
LRTM2-203ENST00000539859 THOC2Q8NI27 1593 aaKnown RBP29.68■■■□□ 2.34
LRTM2-203ENST00000539859 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
LRTM2-203ENST00000539859 SMARCA2P51531 1590 aa29.64■■■□□ 2.33
LRTM2-203ENST00000539859 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
LRTM2-203ENST00000539859 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
LRTM2-203ENST00000539859 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
LRTM2-203ENST00000539859 KIF21AQ7Z4S6 1674 aa29.38■■■□□ 2.29
LRTM2-203ENST00000539859 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
LRTM2-203ENST00000539859 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
LRTM2-203ENST00000539859 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
LRTM2-203ENST00000539859 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
LRTM2-203ENST00000539859 WDR62O43379 1518 aa29.07■■■□□ 2.24
LRTM2-203ENST00000539859 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
LRTM2-203ENST00000539859 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
LRTM2-203ENST00000539859 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
LRTM2-203ENST00000539859 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
LRTM2-203ENST00000539859 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
LRTM2-203ENST00000539859 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
LRTM2-203ENST00000539859 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
LRTM2-203ENST00000539859 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
LRTM2-203ENST00000539859 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
LRTM2-203ENST00000539859 WIZO95785 1651 aa28.49■■■□□ 2.15
LRTM2-203ENST00000539859 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
LRTM2-203ENST00000539859 CFTRP13569 1480 aa28.46■■■□□ 2.15
LRTM2-203ENST00000539859 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
LRTM2-203ENST00000539859 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
LRTM2-203ENST00000539859 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
LRTM2-203ENST00000539859 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
LRTM2-203ENST00000539859 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
LRTM2-203ENST00000539859 ARAP1Q96P48 1450 aa28.18■■■□□ 2.1
LRTM2-203ENST00000539859 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
LRTM2-203ENST00000539859 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
LRTM2-203ENST00000539859 TOP2AP11388 1531 aaKnown RBP28.1■■■□□ 2.09
LRTM2-203ENST00000539859 CHD1O14646 1710 aa28.09■■■□□ 2.09
LRTM2-203ENST00000539859 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
LRTM2-203ENST00000539859 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
LRTM2-203ENST00000539859 FBLN2P98095 1184 aa27.97■■■□□ 2.07
LRTM2-203ENST00000539859 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
LRTM2-203ENST00000539859 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.06
LRTM2-203ENST00000539859 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
LRTM2-203ENST00000539859 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
LRTM2-203ENST00000539859 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
LRTM2-203ENST00000539859 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
LRTM2-203ENST00000539859 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
LRTM2-203ENST00000539859 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
LRTM2-203ENST00000539859 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.02
LRTM2-203ENST00000539859 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
LRTM2-203ENST00000539859 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
LRTM2-203ENST00000539859 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
LRTM2-203ENST00000539859 WDR97A6NE52 1622 aa27.55■■■□□ 2
LRTM2-203ENST00000539859 MAGI1Q96QZ7 1491 aaPredicted RBP27.53■■■□□ 2
LRTM2-203ENST00000539859 SOGA1O94964 1423 aa27.53■■■□□ 2
LRTM2-203ENST00000539859 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
LRTM2-203ENST00000539859 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
LRTM2-203ENST00000539859 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
LRTM2-203ENST00000539859 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
LRTM2-203ENST00000539859 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.98
LRTM2-203ENST00000539859 PBRM1Q86U86 1689 aa27.28■■□□□ 1.96
LRTM2-203ENST00000539859 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
LRTM2-203ENST00000539859 CUX1P39880 1505 aa27.19■■□□□ 1.94
LRTM2-203ENST00000539859 KIF13AQ9H1H9 1805 aa27.15■■□□□ 1.94
LRTM2-203ENST00000539859 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
LRTM2-203ENST00000539859 ILDR1Q86SU0 546 aaPredicted RBP27.1■■□□□ 1.93
LRTM2-203ENST00000539859 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
LRTM2-203ENST00000539859 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
LRTM2-203ENST00000539859 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
LRTM2-203ENST00000539859 NUP160Q12769 1436 aa26.99■■□□□ 1.91
LRTM2-203ENST00000539859 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
LRTM2-203ENST00000539859 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
LRTM2-203ENST00000539859 FAM69CQ0P6D2 419 aa26.92■■□□□ 1.9
LRTM2-203ENST00000539859 KDM4FA0A1W2PPD8 638 aa26.91■■□□□ 1.9
LRTM2-203ENST00000539859 ABCC10Q5T3U5 1492 aa26.89■■□□□ 1.9
LRTM2-203ENST00000539859 KDM6BO15054 1643 aa26.88■■□□□ 1.89
LRTM2-203ENST00000539859 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
LRTM2-203ENST00000539859 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms