RNA–Protein interactions for RNA: ENST00000539408.5

GABARAPL1-207, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-207ENST00000539408 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
GABARAPL1-207ENST00000539408 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
GABARAPL1-207ENST00000539408 ABCC9O60706 1549 aa28.08■■■□□ 2.09
GABARAPL1-207ENST00000539408 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
GABARAPL1-207ENST00000539408 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
GABARAPL1-207ENST00000539408 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
GABARAPL1-207ENST00000539408 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
GABARAPL1-207ENST00000539408 NACADO15069 1562 aa26.44■■□□□ 1.82
GABARAPL1-207ENST00000539408 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
GABARAPL1-207ENST00000539408 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
GABARAPL1-207ENST00000539408 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
GABARAPL1-207ENST00000539408 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
GABARAPL1-207ENST00000539408 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
GABARAPL1-207ENST00000539408 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
GABARAPL1-207ENST00000539408 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
GABARAPL1-207ENST00000539408 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
GABARAPL1-207ENST00000539408 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
GABARAPL1-207ENST00000539408 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
GABARAPL1-207ENST00000539408 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
GABARAPL1-207ENST00000539408 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
GABARAPL1-207ENST00000539408 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
GABARAPL1-207ENST00000539408 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
GABARAPL1-207ENST00000539408 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
GABARAPL1-207ENST00000539408 CUX2O14529 1486 aa24.48■■□□□ 1.51
GABARAPL1-207ENST00000539408 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
GABARAPL1-207ENST00000539408 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
GABARAPL1-207ENST00000539408 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
GABARAPL1-207ENST00000539408 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
GABARAPL1-207ENST00000539408 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
GABARAPL1-207ENST00000539408 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
GABARAPL1-207ENST00000539408 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
GABARAPL1-207ENST00000539408 NESP48681 1621 aa23.99■■□□□ 1.43
GABARAPL1-207ENST00000539408 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
GABARAPL1-207ENST00000539408 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
GABARAPL1-207ENST00000539408 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
GABARAPL1-207ENST00000539408 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
GABARAPL1-207ENST00000539408 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
GABARAPL1-207ENST00000539408 FOXD1Q16676 465 aa23.8■■□□□ 1.4
GABARAPL1-207ENST00000539408 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
GABARAPL1-207ENST00000539408 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
GABARAPL1-207ENST00000539408 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
GABARAPL1-207ENST00000539408 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
GABARAPL1-207ENST00000539408 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
GABARAPL1-207ENST00000539408 WDR62O43379 1518 aa23.51■■□□□ 1.35
GABARAPL1-207ENST00000539408 POTEDQ86YR6 584 aa23.42■■□□□ 1.34
GABARAPL1-207ENST00000539408 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
GABARAPL1-207ENST00000539408 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
GABARAPL1-207ENST00000539408 WIZO95785 1651 aa23.35■■□□□ 1.33
GABARAPL1-207ENST00000539408 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
GABARAPL1-207ENST00000539408 CFTRP13569 1480 aa23.3■■□□□ 1.32
GABARAPL1-207ENST00000539408 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
GABARAPL1-207ENST00000539408 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
GABARAPL1-207ENST00000539408 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
GABARAPL1-207ENST00000539408 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
GABARAPL1-207ENST00000539408 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
GABARAPL1-207ENST00000539408 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
GABARAPL1-207ENST00000539408 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
GABARAPL1-207ENST00000539408 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
GABARAPL1-207ENST00000539408 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
GABARAPL1-207ENST00000539408 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
GABARAPL1-207ENST00000539408 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
GABARAPL1-207ENST00000539408 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
GABARAPL1-207ENST00000539408 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
GABARAPL1-207ENST00000539408 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
GABARAPL1-207ENST00000539408 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
GABARAPL1-207ENST00000539408 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
GABARAPL1-207ENST00000539408 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
GABARAPL1-207ENST00000539408 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
GABARAPL1-207ENST00000539408 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
GABARAPL1-207ENST00000539408 FBLN2P98095 1184 aa22.63■■□□□ 1.21
GABARAPL1-207ENST00000539408 MSH5O43196 834 aa22.6■■□□□ 1.21
GABARAPL1-207ENST00000539408 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
GABARAPL1-207ENST00000539408 CHD1O14646 1710 aa22.57■■□□□ 1.2
GABARAPL1-207ENST00000539408 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
GABARAPL1-207ENST00000539408 SOGA1O94964 1423 aa22.53■■□□□ 1.2
GABARAPL1-207ENST00000539408 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
GABARAPL1-207ENST00000539408 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
GABARAPL1-207ENST00000539408 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
GABARAPL1-207ENST00000539408 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
GABARAPL1-207ENST00000539408 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
GABARAPL1-207ENST00000539408 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
GABARAPL1-207ENST00000539408 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
GABARAPL1-207ENST00000539408 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
GABARAPL1-207ENST00000539408 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
GABARAPL1-207ENST00000539408 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
GABARAPL1-207ENST00000539408 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
GABARAPL1-207ENST00000539408 CUX1P39880 1505 aa22.27■■□□□ 1.16
GABARAPL1-207ENST00000539408 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
GABARAPL1-207ENST00000539408 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
GABARAPL1-207ENST00000539408 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
GABARAPL1-207ENST00000539408 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
GABARAPL1-207ENST00000539408 PIAS4Q8N2W9 510 aaPredicted RBP22.07■■□□□ 1.12
GABARAPL1-207ENST00000539408 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
GABARAPL1-207ENST00000539408 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
GABARAPL1-207ENST00000539408 NUP160Q12769 1436 aa22.01■■□□□ 1.11
GABARAPL1-207ENST00000539408 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
GABARAPL1-207ENST00000539408 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
GABARAPL1-207ENST00000539408 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
GABARAPL1-207ENST00000539408 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
GABARAPL1-207ENST00000539408 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms