RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
CTCFL-212ENST00000539382 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
CTCFL-212ENST00000539382 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
CTCFL-212ENST00000539382 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.97
CTCFL-212ENST00000539382 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
CTCFL-212ENST00000539382 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
CTCFL-212ENST00000539382 ABCC9O60706 1549 aa20.79■□□□□ 0.92
CTCFL-212ENST00000539382 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
CTCFL-212ENST00000539382 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
CTCFL-212ENST00000539382 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
CTCFL-212ENST00000539382 NACADO15069 1562 aa20.36■□□□□ 0.85
CTCFL-212ENST00000539382 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
CTCFL-212ENST00000539382 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
CTCFL-212ENST00000539382 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
CTCFL-212ENST00000539382 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
CTCFL-212ENST00000539382 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
CTCFL-212ENST00000539382 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
CTCFL-212ENST00000539382 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.74
CTCFL-212ENST00000539382 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.73
CTCFL-212ENST00000539382 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
CTCFL-212ENST00000539382 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
CTCFL-212ENST00000539382 WIZO95785 1651 aa19.33■□□□□ 0.69
CTCFL-212ENST00000539382 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
CTCFL-212ENST00000539382 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CTCFL-212ENST00000539382 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
CTCFL-212ENST00000539382 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
CTCFL-212ENST00000539382 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
CTCFL-212ENST00000539382 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
CTCFL-212ENST00000539382 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
CTCFL-212ENST00000539382 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
CTCFL-212ENST00000539382 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
CTCFL-212ENST00000539382 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
CTCFL-212ENST00000539382 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
CTCFL-212ENST00000539382 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.59
CTCFL-212ENST00000539382 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
CTCFL-212ENST00000539382 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
CTCFL-212ENST00000539382 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
CTCFL-212ENST00000539382 CFTRP13569 1480 aa18.44■□□□□ 0.54
CTCFL-212ENST00000539382 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CTCFL-212ENST00000539382 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
CTCFL-212ENST00000539382 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
CTCFL-212ENST00000539382 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
CTCFL-212ENST00000539382 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
CTCFL-212ENST00000539382 NESP48681 1621 aa18.29■□□□□ 0.52
CTCFL-212ENST00000539382 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
CTCFL-212ENST00000539382 SOGA1O94964 1423 aa18.25■□□□□ 0.51
CTCFL-212ENST00000539382 CUX1P39880 1505 aa18.22■□□□□ 0.51
CTCFL-212ENST00000539382 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
CTCFL-212ENST00000539382 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
CTCFL-212ENST00000539382 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
CTCFL-212ENST00000539382 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
CTCFL-212ENST00000539382 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
CTCFL-212ENST00000539382 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
CTCFL-212ENST00000539382 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
CTCFL-212ENST00000539382 EEA1Q15075 1411 aa18.05■□□□□ 0.48
CTCFL-212ENST00000539382 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
CTCFL-212ENST00000539382 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
CTCFL-212ENST00000539382 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
CTCFL-212ENST00000539382 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
CTCFL-212ENST00000539382 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
CTCFL-212ENST00000539382 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
CTCFL-212ENST00000539382 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
CTCFL-212ENST00000539382 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
CTCFL-212ENST00000539382 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
CTCFL-212ENST00000539382 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
CTCFL-212ENST00000539382 CUX2O14529 1486 aa17.88■□□□□ 0.45
CTCFL-212ENST00000539382 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
CTCFL-212ENST00000539382 KIF21BO75037 1637 aa17.85■□□□□ 0.45
CTCFL-212ENST00000539382 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
CTCFL-212ENST00000539382 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
CTCFL-212ENST00000539382 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
CTCFL-212ENST00000539382 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
CTCFL-212ENST00000539382 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
CTCFL-212ENST00000539382 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
CTCFL-212ENST00000539382 IGF1RP08069 1367 aa17.8■□□□□ 0.44
CTCFL-212ENST00000539382 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
CTCFL-212ENST00000539382 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
CTCFL-212ENST00000539382 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
CTCFL-212ENST00000539382 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
CTCFL-212ENST00000539382 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
CTCFL-212ENST00000539382 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
CTCFL-212ENST00000539382 WDR62O43379 1518 aa17.72■□□□□ 0.43
CTCFL-212ENST00000539382 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
CTCFL-212ENST00000539382 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
CTCFL-212ENST00000539382 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
CTCFL-212ENST00000539382 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
CTCFL-212ENST00000539382 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
CTCFL-212ENST00000539382 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CTCFL-212ENST00000539382 CLIP1P30622 1438 aa17.61■□□□□ 0.41
CTCFL-212ENST00000539382 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.413e-6■■■□□ 17.6
CTCFL-212ENST00000539382 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-212ENST00000539382 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
CTCFL-212ENST00000539382 CUL7Q14999 1698 aa17.54■□□□□ 0.4
CTCFL-212ENST00000539382 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
CTCFL-212ENST00000539382 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
CTCFL-212ENST00000539382 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
CTCFL-212ENST00000539382 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
CTCFL-212ENST00000539382 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
CTCFL-212ENST00000539382 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
CTCFL-212ENST00000539382 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms