RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-213ENST00000539357 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
POLE-213ENST00000539357 ABCC9O60706 1549 aa30.82■■■□□ 2.52
POLE-213ENST00000539357 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
POLE-213ENST00000539357 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
POLE-213ENST00000539357 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
POLE-213ENST00000539357 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
POLE-213ENST00000539357 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
POLE-213ENST00000539357 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
POLE-213ENST00000539357 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
POLE-213ENST00000539357 NACADO15069 1562 aa28.03■■■□□ 2.08
POLE-213ENST00000539357 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
POLE-213ENST00000539357 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
POLE-213ENST00000539357 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
POLE-213ENST00000539357 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
POLE-213ENST00000539357 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
POLE-213ENST00000539357 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
POLE-213ENST00000539357 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
POLE-213ENST00000539357 CUX2O14529 1486 aa26.76■■□□□ 1.87
POLE-213ENST00000539357 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
POLE-213ENST00000539357 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
POLE-213ENST00000539357 ZCCHC6Q5VYS8 1495 aaKnown RBP26.46■■□□□ 1.83
POLE-213ENST00000539357 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
POLE-213ENST00000539357 NESP48681 1621 aa26.18■■□□□ 1.78
POLE-213ENST00000539357 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
POLE-213ENST00000539357 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
POLE-213ENST00000539357 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
POLE-213ENST00000539357 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
POLE-213ENST00000539357 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
POLE-213ENST00000539357 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
POLE-213ENST00000539357 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
POLE-213ENST00000539357 LAMC3Q9Y6N6 1575 aa25.53■■□□□ 1.68
POLE-213ENST00000539357 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
POLE-213ENST00000539357 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
POLE-213ENST00000539357 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
POLE-213ENST00000539357 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
POLE-213ENST00000539357 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
POLE-213ENST00000539357 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
POLE-213ENST00000539357 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
POLE-213ENST00000539357 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
POLE-213ENST00000539357 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
POLE-213ENST00000539357 WDR62O43379 1518 aa25.29■■□□□ 1.64
POLE-213ENST00000539357 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
POLE-213ENST00000539357 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
POLE-213ENST00000539357 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
POLE-213ENST00000539357 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
POLE-213ENST00000539357 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
POLE-213ENST00000539357 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
POLE-213ENST00000539357 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
POLE-213ENST00000539357 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
POLE-213ENST00000539357 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
POLE-213ENST00000539357 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
POLE-213ENST00000539357 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
POLE-213ENST00000539357 WIZO95785 1651 aa24.7■■□□□ 1.54
POLE-213ENST00000539357 CHD1O14646 1710 aa24.64■■□□□ 1.54
POLE-213ENST00000539357 CFTRP13569 1480 aa24.57■■□□□ 1.52
POLE-213ENST00000539357 FBLN2P98095 1184 aa24.56■■□□□ 1.52
POLE-213ENST00000539357 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
POLE-213ENST00000539357 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
POLE-213ENST00000539357 ILDR1Q86SU0 546 aaPredicted RBP24.49■■□□□ 1.51
POLE-213ENST00000539357 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.5
POLE-213ENST00000539357 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
POLE-213ENST00000539357 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
POLE-213ENST00000539357 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
POLE-213ENST00000539357 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
POLE-213ENST00000539357 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
POLE-213ENST00000539357 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
POLE-213ENST00000539357 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
POLE-213ENST00000539357 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
POLE-213ENST00000539357 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
POLE-213ENST00000539357 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
POLE-213ENST00000539357 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
POLE-213ENST00000539357 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
POLE-213ENST00000539357 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
POLE-213ENST00000539357 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
POLE-213ENST00000539357 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
POLE-213ENST00000539357 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
POLE-213ENST00000539357 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
POLE-213ENST00000539357 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
POLE-213ENST00000539357 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
POLE-213ENST00000539357 SOGA1O94964 1423 aa23.87■■□□□ 1.41
POLE-213ENST00000539357 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
POLE-213ENST00000539357 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
POLE-213ENST00000539357 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
POLE-213ENST00000539357 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
POLE-213ENST00000539357 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
POLE-213ENST00000539357 FAM69CQ0P6D2 419 aa23.66■■□□□ 1.38
POLE-213ENST00000539357 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
POLE-213ENST00000539357 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
POLE-213ENST00000539357 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
POLE-213ENST00000539357 KDM6BO15054 1643 aa23.58■■□□□ 1.36
POLE-213ENST00000539357 CUX1P39880 1505 aa23.51■■□□□ 1.35
POLE-213ENST00000539357 HECW2Q9P2P5 1572 aa23.5■■□□□ 1.35
POLE-213ENST00000539357 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
POLE-213ENST00000539357 DIP2BQ9P265 1576 aa23.45■■□□□ 1.34
POLE-213ENST00000539357 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
POLE-213ENST00000539357 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
POLE-213ENST00000539357 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
POLE-213ENST00000539357 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
POLE-213ENST00000539357 NUP160Q12769 1436 aa23.36■■□□□ 1.33
POLE-213ENST00000539357 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms