RNA–Protein interactions for RNA: ENST00000539337.2

LIPM-202, Transcript of lipase family member M, humanhuman

TSL 2 BASIC

Gene LIPM, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPM-202ENST00000539337 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
LIPM-202ENST00000539337 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
LIPM-202ENST00000539337 ABCC9O60706 1549 aa22.45■■□□□ 1.18
LIPM-202ENST00000539337 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
LIPM-202ENST00000539337 NACADO15069 1562 aa21.26■□□□□ 0.99
LIPM-202ENST00000539337 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
LIPM-202ENST00000539337 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
LIPM-202ENST00000539337 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
LIPM-202ENST00000539337 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
LIPM-202ENST00000539337 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
LIPM-202ENST00000539337 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
LIPM-202ENST00000539337 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
LIPM-202ENST00000539337 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
LIPM-202ENST00000539337 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
LIPM-202ENST00000539337 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
LIPM-202ENST00000539337 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
LIPM-202ENST00000539337 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
LIPM-202ENST00000539337 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
LIPM-202ENST00000539337 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
LIPM-202ENST00000539337 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
LIPM-202ENST00000539337 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
LIPM-202ENST00000539337 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
LIPM-202ENST00000539337 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
LIPM-202ENST00000539337 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
LIPM-202ENST00000539337 CUX2O14529 1486 aa19.41■□□□□ 0.7
LIPM-202ENST00000539337 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
LIPM-202ENST00000539337 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
LIPM-202ENST00000539337 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
LIPM-202ENST00000539337 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
LIPM-202ENST00000539337 NESP48681 1621 aa19.3■□□□□ 0.68
LIPM-202ENST00000539337 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
LIPM-202ENST00000539337 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
LIPM-202ENST00000539337 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
LIPM-202ENST00000539337 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
LIPM-202ENST00000539337 WIZO95785 1651 aa19.05■□□□□ 0.64
LIPM-202ENST00000539337 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
LIPM-202ENST00000539337 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
LIPM-202ENST00000539337 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
LIPM-202ENST00000539337 WDR62O43379 1518 aa18.89■□□□□ 0.61
LIPM-202ENST00000539337 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
LIPM-202ENST00000539337 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
LIPM-202ENST00000539337 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
LIPM-202ENST00000539337 CFTRP13569 1480 aa18.79■□□□□ 0.6
LIPM-202ENST00000539337 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
LIPM-202ENST00000539337 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
LIPM-202ENST00000539337 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
LIPM-202ENST00000539337 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
LIPM-202ENST00000539337 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
LIPM-202ENST00000539337 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
LIPM-202ENST00000539337 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
LIPM-202ENST00000539337 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
LIPM-202ENST00000539337 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
LIPM-202ENST00000539337 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
LIPM-202ENST00000539337 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
LIPM-202ENST00000539337 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
LIPM-202ENST00000539337 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
LIPM-202ENST00000539337 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
LIPM-202ENST00000539337 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
LIPM-202ENST00000539337 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
LIPM-202ENST00000539337 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
LIPM-202ENST00000539337 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
LIPM-202ENST00000539337 CHD1O14646 1710 aa18.24■□□□□ 0.51
LIPM-202ENST00000539337 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
LIPM-202ENST00000539337 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
LIPM-202ENST00000539337 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
LIPM-202ENST00000539337 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
LIPM-202ENST00000539337 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
LIPM-202ENST00000539337 SOGA1O94964 1423 aa18.11■□□□□ 0.49
LIPM-202ENST00000539337 CUX1P39880 1505 aa18.1■□□□□ 0.49
LIPM-202ENST00000539337 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
LIPM-202ENST00000539337 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
LIPM-202ENST00000539337 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
LIPM-202ENST00000539337 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
LIPM-202ENST00000539337 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
LIPM-202ENST00000539337 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
LIPM-202ENST00000539337 FBLN2P98095 1184 aa18■□□□□ 0.47
LIPM-202ENST00000539337 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
LIPM-202ENST00000539337 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
LIPM-202ENST00000539337 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
LIPM-202ENST00000539337 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
LIPM-202ENST00000539337 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
LIPM-202ENST00000539337 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
LIPM-202ENST00000539337 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
LIPM-202ENST00000539337 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
LIPM-202ENST00000539337 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
LIPM-202ENST00000539337 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
LIPM-202ENST00000539337 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
LIPM-202ENST00000539337 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
LIPM-202ENST00000539337 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
LIPM-202ENST00000539337 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
LIPM-202ENST00000539337 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
LIPM-202ENST00000539337 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
LIPM-202ENST00000539337 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
LIPM-202ENST00000539337 NUP160Q12769 1436 aa17.72■□□□□ 0.43
LIPM-202ENST00000539337 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
LIPM-202ENST00000539337 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
LIPM-202ENST00000539337 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
LIPM-202ENST00000539337 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
LIPM-202ENST00000539337 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
LIPM-202ENST00000539337 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms