RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
PRPF19-203ENST00000539180 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
PRPF19-203ENST00000539180 ABCC9O60706 1549 aa31.77■■■□□ 2.68
PRPF19-203ENST00000539180 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
PRPF19-203ENST00000539180 NACADO15069 1562 aa30.69■■■□□ 2.5
PRPF19-203ENST00000539180 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
PRPF19-203ENST00000539180 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
PRPF19-203ENST00000539180 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
PRPF19-203ENST00000539180 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
PRPF19-203ENST00000539180 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
PRPF19-203ENST00000539180 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
PRPF19-203ENST00000539180 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
PRPF19-203ENST00000539180 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
PRPF19-203ENST00000539180 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
PRPF19-203ENST00000539180 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
PRPF19-203ENST00000539180 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
PRPF19-203ENST00000539180 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
PRPF19-203ENST00000539180 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
PRPF19-203ENST00000539180 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
PRPF19-203ENST00000539180 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
PRPF19-203ENST00000539180 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
PRPF19-203ENST00000539180 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
PRPF19-203ENST00000539180 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
PRPF19-203ENST00000539180 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
PRPF19-203ENST00000539180 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
PRPF19-203ENST00000539180 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
PRPF19-203ENST00000539180 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
PRPF19-203ENST00000539180 WIZO95785 1651 aa28.04■■■□□ 2.08
PRPF19-203ENST00000539180 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
PRPF19-203ENST00000539180 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
PRPF19-203ENST00000539180 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
PRPF19-203ENST00000539180 NESP48681 1621 aa27.56■■■□□ 2
PRPF19-203ENST00000539180 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
PRPF19-203ENST00000539180 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
PRPF19-203ENST00000539180 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
PRPF19-203ENST00000539180 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
PRPF19-203ENST00000539180 CFTRP13569 1480 aa27.32■■□□□ 1.96
PRPF19-203ENST00000539180 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
PRPF19-203ENST00000539180 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
PRPF19-203ENST00000539180 PDS5BQ9NTI5 1447 aa27.25■■□□□ 1.95
PRPF19-203ENST00000539180 CUX2O14529 1486 aa27.13■■□□□ 1.93
PRPF19-203ENST00000539180 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
PRPF19-203ENST00000539180 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
PRPF19-203ENST00000539180 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
PRPF19-203ENST00000539180 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
PRPF19-203ENST00000539180 WDR62O43379 1518 aa27.03■■□□□ 1.92
PRPF19-203ENST00000539180 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
PRPF19-203ENST00000539180 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
PRPF19-203ENST00000539180 TOPBP1Q92547 1522 aa26.73■■□□□ 1.87
PRPF19-203ENST00000539180 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
PRPF19-203ENST00000539180 CUX1P39880 1505 aa26.58■■□□□ 1.85
PRPF19-203ENST00000539180 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
PRPF19-203ENST00000539180 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
PRPF19-203ENST00000539180 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
PRPF19-203ENST00000539180 BIVM-ERCC5R4GMW8 1640 aa26.45■■□□□ 1.82
PRPF19-203ENST00000539180 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
PRPF19-203ENST00000539180 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
PRPF19-203ENST00000539180 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
PRPF19-203ENST00000539180 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
PRPF19-203ENST00000539180 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
PRPF19-203ENST00000539180 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
PRPF19-203ENST00000539180 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
PRPF19-203ENST00000539180 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
PRPF19-203ENST00000539180 SOGA1O94964 1423 aa26.29■■□□□ 1.8
PRPF19-203ENST00000539180 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
PRPF19-203ENST00000539180 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
PRPF19-203ENST00000539180 AQRO60306 1485 aaKnown RBP eCLIP26.18■■□□□ 1.78
PRPF19-203ENST00000539180 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
PRPF19-203ENST00000539180 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
PRPF19-203ENST00000539180 CHD1O14646 1710 aa26.05■■□□□ 1.76
PRPF19-203ENST00000539180 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
PRPF19-203ENST00000539180 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
PRPF19-203ENST00000539180 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
PRPF19-203ENST00000539180 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
PRPF19-203ENST00000539180 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
PRPF19-203ENST00000539180 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
PRPF19-203ENST00000539180 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
PRPF19-203ENST00000539180 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
PRPF19-203ENST00000539180 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
PRPF19-203ENST00000539180 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
PRPF19-203ENST00000539180 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
PRPF19-203ENST00000539180 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
PRPF19-203ENST00000539180 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
PRPF19-203ENST00000539180 CUL7Q14999 1698 aa25.74■■□□□ 1.71
PRPF19-203ENST00000539180 FBLN2P98095 1184 aa25.68■■□□□ 1.7
PRPF19-203ENST00000539180 CEP170Q5SW79 1584 aa25.67■■□□□ 1.7
PRPF19-203ENST00000539180 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
PRPF19-203ENST00000539180 NUP160Q12769 1436 aa25.64■■□□□ 1.7
PRPF19-203ENST00000539180 IGF1RP08069 1367 aa25.64■■□□□ 1.69
PRPF19-203ENST00000539180 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
PRPF19-203ENST00000539180 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
PRPF19-203ENST00000539180 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
PRPF19-203ENST00000539180 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
PRPF19-203ENST00000539180 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
PRPF19-203ENST00000539180 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
PRPF19-203ENST00000539180 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
PRPF19-203ENST00000539180 CARMIL1Q5VZK9 1371 aa25.47■■□□□ 1.67
PRPF19-203ENST00000539180 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
PRPF19-203ENST00000539180 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
PRPF19-203ENST00000539180 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 985.5 ms