RNA–Protein interactions for RNA: ENST00000539154.1

MEFV-208, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-208ENST00000539154 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
MEFV-208ENST00000539154 ABCC9O60706 1549 aa21.09■□□□□ 0.97
MEFV-208ENST00000539154 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
MEFV-208ENST00000539154 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
MEFV-208ENST00000539154 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
MEFV-208ENST00000539154 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
MEFV-208ENST00000539154 NACADO15069 1562 aa19.75■□□□□ 0.75
MEFV-208ENST00000539154 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
MEFV-208ENST00000539154 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
MEFV-208ENST00000539154 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
MEFV-208ENST00000539154 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
MEFV-208ENST00000539154 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
MEFV-208ENST00000539154 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
MEFV-208ENST00000539154 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
MEFV-208ENST00000539154 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
MEFV-208ENST00000539154 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
MEFV-208ENST00000539154 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
MEFV-208ENST00000539154 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
MEFV-208ENST00000539154 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
MEFV-208ENST00000539154 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
MEFV-208ENST00000539154 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
MEFV-208ENST00000539154 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
MEFV-208ENST00000539154 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
MEFV-208ENST00000539154 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
MEFV-208ENST00000539154 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
MEFV-208ENST00000539154 NESP48681 1621 aa18.12■□□□□ 0.49
MEFV-208ENST00000539154 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
MEFV-208ENST00000539154 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
MEFV-208ENST00000539154 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
MEFV-208ENST00000539154 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
MEFV-208ENST00000539154 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
MEFV-208ENST00000539154 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
MEFV-208ENST00000539154 CUX2O14529 1486 aa18.03■□□□□ 0.48
MEFV-208ENST00000539154 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
MEFV-208ENST00000539154 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
MEFV-208ENST00000539154 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
MEFV-208ENST00000539154 WIZO95785 1651 aa17.88■□□□□ 0.45
MEFV-208ENST00000539154 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
MEFV-208ENST00000539154 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
MEFV-208ENST00000539154 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
MEFV-208ENST00000539154 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
MEFV-208ENST00000539154 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
MEFV-208ENST00000539154 WDR62O43379 1518 aa17.58■□□□□ 0.41
MEFV-208ENST00000539154 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
MEFV-208ENST00000539154 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
MEFV-208ENST00000539154 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
MEFV-208ENST00000539154 CFTRP13569 1480 aa17.5■□□□□ 0.39
MEFV-208ENST00000539154 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
MEFV-208ENST00000539154 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
MEFV-208ENST00000539154 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
MEFV-208ENST00000539154 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
MEFV-208ENST00000539154 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
MEFV-208ENST00000539154 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
MEFV-208ENST00000539154 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
MEFV-208ENST00000539154 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
MEFV-208ENST00000539154 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
MEFV-208ENST00000539154 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
MEFV-208ENST00000539154 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
MEFV-208ENST00000539154 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
MEFV-208ENST00000539154 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
MEFV-208ENST00000539154 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.33
MEFV-208ENST00000539154 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
MEFV-208ENST00000539154 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
MEFV-208ENST00000539154 CHD1O14646 1710 aa17.07■□□□□ 0.32
MEFV-208ENST00000539154 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
MEFV-208ENST00000539154 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
MEFV-208ENST00000539154 FBLN2P98095 1184 aa17.04■□□□□ 0.32
MEFV-208ENST00000539154 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
MEFV-208ENST00000539154 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
MEFV-208ENST00000539154 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
MEFV-208ENST00000539154 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
MEFV-208ENST00000539154 SOGA1O94964 1423 aa16.97■□□□□ 0.31
MEFV-208ENST00000539154 CUX1P39880 1505 aa16.96■□□□□ 0.31
MEFV-208ENST00000539154 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
MEFV-208ENST00000539154 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
MEFV-208ENST00000539154 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
MEFV-208ENST00000539154 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
MEFV-208ENST00000539154 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
MEFV-208ENST00000539154 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
MEFV-208ENST00000539154 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
MEFV-208ENST00000539154 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
MEFV-208ENST00000539154 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
MEFV-208ENST00000539154 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
MEFV-208ENST00000539154 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
MEFV-208ENST00000539154 SYNJ1O43426 1573 aa16.77■□□□□ 0.27
MEFV-208ENST00000539154 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
MEFV-208ENST00000539154 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
MEFV-208ENST00000539154 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
MEFV-208ENST00000539154 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
MEFV-208ENST00000539154 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
MEFV-208ENST00000539154 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
MEFV-208ENST00000539154 ADAMTS12P58397 1594 aa16.63■□□□□ 0.25
MEFV-208ENST00000539154 ERCC6L2Q5T890 1561 aa16.63■□□□□ 0.25
MEFV-208ENST00000539154 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
MEFV-208ENST00000539154 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
MEFV-208ENST00000539154 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
MEFV-208ENST00000539154 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
MEFV-208ENST00000539154 NUP160Q12769 1436 aa16.51■□□□□ 0.23
MEFV-208ENST00000539154 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
MEFV-208ENST00000539154 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms