RNA–Protein interactions for RNA: ENST00000539048.2

CACNA2D4-210, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 499 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-210ENST00000539048 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
CACNA2D4-210ENST00000539048 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
CACNA2D4-210ENST00000539048 ABCC9O60706 1549 aa25.77■■□□□ 1.72
CACNA2D4-210ENST00000539048 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
CACNA2D4-210ENST00000539048 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
CACNA2D4-210ENST00000539048 NACADO15069 1562 aa24.86■■□□□ 1.57
CACNA2D4-210ENST00000539048 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
CACNA2D4-210ENST00000539048 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
CACNA2D4-210ENST00000539048 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
CACNA2D4-210ENST00000539048 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
CACNA2D4-210ENST00000539048 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
CACNA2D4-210ENST00000539048 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
CACNA2D4-210ENST00000539048 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
CACNA2D4-210ENST00000539048 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
CACNA2D4-210ENST00000539048 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
CACNA2D4-210ENST00000539048 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
CACNA2D4-210ENST00000539048 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
CACNA2D4-210ENST00000539048 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
CACNA2D4-210ENST00000539048 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
CACNA2D4-210ENST00000539048 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
CACNA2D4-210ENST00000539048 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
CACNA2D4-210ENST00000539048 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
CACNA2D4-210ENST00000539048 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
CACNA2D4-210ENST00000539048 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
CACNA2D4-210ENST00000539048 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
CACNA2D4-210ENST00000539048 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
CACNA2D4-210ENST00000539048 WIZO95785 1651 aa22.81■■□□□ 1.24
CACNA2D4-210ENST00000539048 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
CACNA2D4-210ENST00000539048 RSF1Q96T23 1441 aaPredicted RBP22.68■■□□□ 1.22
CACNA2D4-210ENST00000539048 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
CACNA2D4-210ENST00000539048 NESP48681 1621 aa22.37■■□□□ 1.17
CACNA2D4-210ENST00000539048 LAMC3Q9Y6N6 1575 aa22.34■■□□□ 1.17
CACNA2D4-210ENST00000539048 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
CACNA2D4-210ENST00000539048 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
CACNA2D4-210ENST00000539048 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
CACNA2D4-210ENST00000539048 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
CACNA2D4-210ENST00000539048 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
CACNA2D4-210ENST00000539048 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
CACNA2D4-210ENST00000539048 CFTRP13569 1480 aa22.12■■□□□ 1.13
CACNA2D4-210ENST00000539048 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
CACNA2D4-210ENST00000539048 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
CACNA2D4-210ENST00000539048 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
CACNA2D4-210ENST00000539048 CUX2O14529 1486 aa21.96■■□□□ 1.11
CACNA2D4-210ENST00000539048 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
CACNA2D4-210ENST00000539048 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
CACNA2D4-210ENST00000539048 WDR62O43379 1518 aa21.9■■□□□ 1.1
CACNA2D4-210ENST00000539048 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
CACNA2D4-210ENST00000539048 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
CACNA2D4-210ENST00000539048 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
CACNA2D4-210ENST00000539048 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
CACNA2D4-210ENST00000539048 CUX1P39880 1505 aa21.57■■□□□ 1.04
CACNA2D4-210ENST00000539048 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
CACNA2D4-210ENST00000539048 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
CACNA2D4-210ENST00000539048 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
CACNA2D4-210ENST00000539048 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
CACNA2D4-210ENST00000539048 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
CACNA2D4-210ENST00000539048 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
CACNA2D4-210ENST00000539048 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
CACNA2D4-210ENST00000539048 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
CACNA2D4-210ENST00000539048 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
CACNA2D4-210ENST00000539048 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
CACNA2D4-210ENST00000539048 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
CACNA2D4-210ENST00000539048 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
CACNA2D4-210ENST00000539048 SOGA1O94964 1423 aa21.29■■□□□ 1
CACNA2D4-210ENST00000539048 PBRM1Q86U86 1689 aa21.28■■□□□ 1
CACNA2D4-210ENST00000539048 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CACNA2D4-210ENST00000539048 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
CACNA2D4-210ENST00000539048 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
CACNA2D4-210ENST00000539048 CHD1O14646 1710 aa21.21■□□□□ 0.99
CACNA2D4-210ENST00000539048 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
CACNA2D4-210ENST00000539048 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
CACNA2D4-210ENST00000539048 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
CACNA2D4-210ENST00000539048 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
CACNA2D4-210ENST00000539048 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
CACNA2D4-210ENST00000539048 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
CACNA2D4-210ENST00000539048 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
CACNA2D4-210ENST00000539048 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
CACNA2D4-210ENST00000539048 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
CACNA2D4-210ENST00000539048 CUL7Q14999 1698 aa20.89■□□□□ 0.94
CACNA2D4-210ENST00000539048 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
CACNA2D4-210ENST00000539048 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
CACNA2D4-210ENST00000539048 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
CACNA2D4-210ENST00000539048 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
CACNA2D4-210ENST00000539048 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
CACNA2D4-210ENST00000539048 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
CACNA2D4-210ENST00000539048 FBLN2P98095 1184 aa20.81■□□□□ 0.92
CACNA2D4-210ENST00000539048 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
CACNA2D4-210ENST00000539048 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
CACNA2D4-210ENST00000539048 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
CACNA2D4-210ENST00000539048 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
CACNA2D4-210ENST00000539048 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
CACNA2D4-210ENST00000539048 NUP160Q12769 1436 aa20.77■□□□□ 0.91
CACNA2D4-210ENST00000539048 IGF1RP08069 1367 aa20.76■□□□□ 0.91
CACNA2D4-210ENST00000539048 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
CACNA2D4-210ENST00000539048 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
CACNA2D4-210ENST00000539048 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
CACNA2D4-210ENST00000539048 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
CACNA2D4-210ENST00000539048 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
CACNA2D4-210ENST00000539048 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
CACNA2D4-210ENST00000539048 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms