RNA–Protein interactions for RNA: ENST00000538957.1

SCNN1A-211, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-211ENST00000538957 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
SCNN1A-211ENST00000538957 ABCC9O60706 1549 aa28.76■■■□□ 2.19
SCNN1A-211ENST00000538957 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
SCNN1A-211ENST00000538957 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
SCNN1A-211ENST00000538957 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
SCNN1A-211ENST00000538957 NACADO15069 1562 aa26.76■■□□□ 1.87
SCNN1A-211ENST00000538957 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
SCNN1A-211ENST00000538957 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
SCNN1A-211ENST00000538957 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
SCNN1A-211ENST00000538957 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
SCNN1A-211ENST00000538957 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
SCNN1A-211ENST00000538957 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
SCNN1A-211ENST00000538957 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
SCNN1A-211ENST00000538957 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
SCNN1A-211ENST00000538957 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
SCNN1A-211ENST00000538957 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
SCNN1A-211ENST00000538957 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
SCNN1A-211ENST00000538957 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
SCNN1A-211ENST00000538957 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
SCNN1A-211ENST00000538957 CUX2O14529 1486 aa25.05■■□□□ 1.6
SCNN1A-211ENST00000538957 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
SCNN1A-211ENST00000538957 NCAPD3P42695 1498 aa24.65■■□□□ 1.54
SCNN1A-211ENST00000538957 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
SCNN1A-211ENST00000538957 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
SCNN1A-211ENST00000538957 NESP48681 1621 aa24.48■■□□□ 1.51
SCNN1A-211ENST00000538957 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
SCNN1A-211ENST00000538957 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
SCNN1A-211ENST00000538957 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
SCNN1A-211ENST00000538957 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
SCNN1A-211ENST00000538957 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
SCNN1A-211ENST00000538957 LAMC3Q9Y6N6 1575 aa24.26■■□□□ 1.47
SCNN1A-211ENST00000538957 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
SCNN1A-211ENST00000538957 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
SCNN1A-211ENST00000538957 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
SCNN1A-211ENST00000538957 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
SCNN1A-211ENST00000538957 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
SCNN1A-211ENST00000538957 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
SCNN1A-211ENST00000538957 WDR62O43379 1518 aa23.9■■□□□ 1.42
SCNN1A-211ENST00000538957 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
SCNN1A-211ENST00000538957 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
SCNN1A-211ENST00000538957 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
SCNN1A-211ENST00000538957 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
SCNN1A-211ENST00000538957 WIZO95785 1651 aa23.6■■□□□ 1.37
SCNN1A-211ENST00000538957 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
SCNN1A-211ENST00000538957 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
SCNN1A-211ENST00000538957 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
SCNN1A-211ENST00000538957 CFTRP13569 1480 aa23.49■■□□□ 1.35
SCNN1A-211ENST00000538957 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
SCNN1A-211ENST00000538957 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
SCNN1A-211ENST00000538957 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
SCNN1A-211ENST00000538957 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
SCNN1A-211ENST00000538957 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
SCNN1A-211ENST00000538957 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
SCNN1A-211ENST00000538957 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
SCNN1A-211ENST00000538957 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
SCNN1A-211ENST00000538957 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
SCNN1A-211ENST00000538957 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
SCNN1A-211ENST00000538957 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
SCNN1A-211ENST00000538957 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
SCNN1A-211ENST00000538957 FBLN2P98095 1184 aa23.14■■□□□ 1.29
SCNN1A-211ENST00000538957 CHD1O14646 1710 aa23.13■■□□□ 1.29
SCNN1A-211ENST00000538957 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
SCNN1A-211ENST00000538957 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
SCNN1A-211ENST00000538957 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
SCNN1A-211ENST00000538957 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.284e-8■■■■■ 31.9
SCNN1A-211ENST00000538957 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
SCNN1A-211ENST00000538957 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
SCNN1A-211ENST00000538957 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
SCNN1A-211ENST00000538957 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
SCNN1A-211ENST00000538957 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
SCNN1A-211ENST00000538957 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
SCNN1A-211ENST00000538957 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
SCNN1A-211ENST00000538957 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
SCNN1A-211ENST00000538957 SOGA1O94964 1423 aa22.78■■□□□ 1.24
SCNN1A-211ENST00000538957 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
SCNN1A-211ENST00000538957 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
SCNN1A-211ENST00000538957 MAGI1Q96QZ7 1491 aaPredicted RBP22.72■■□□□ 1.23
SCNN1A-211ENST00000538957 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
SCNN1A-211ENST00000538957 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
SCNN1A-211ENST00000538957 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
SCNN1A-211ENST00000538957 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
SCNN1A-211ENST00000538957 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
SCNN1A-211ENST00000538957 CUX1P39880 1505 aa22.49■■□□□ 1.19
SCNN1A-211ENST00000538957 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
SCNN1A-211ENST00000538957 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
SCNN1A-211ENST00000538957 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
SCNN1A-211ENST00000538957 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
SCNN1A-211ENST00000538957 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
SCNN1A-211ENST00000538957 KIF13AQ9H1H9 1805 aa22.28■■□□□ 1.16
SCNN1A-211ENST00000538957 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
SCNN1A-211ENST00000538957 NUP160Q12769 1436 aa22.25■■□□□ 1.15
SCNN1A-211ENST00000538957 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
SCNN1A-211ENST00000538957 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
SCNN1A-211ENST00000538957 FAM69CQ0P6D2 419 aa22.2■■□□□ 1.14
SCNN1A-211ENST00000538957 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
SCNN1A-211ENST00000538957 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
SCNN1A-211ENST00000538957 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
SCNN1A-211ENST00000538957 ABCC10Q5T3U5 1492 aa22.11■■□□□ 1.13
SCNN1A-211ENST00000538957 KDM6BO15054 1643 aa22.09■■□□□ 1.13
SCNN1A-211ENST00000538957 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
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