RNA–Protein interactions for RNA: ENST00000538840.1

CD163-207, Transcript of CD163 molecule, humanhuman

TSL 2

Gene CD163, Length 705 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD163-207ENST00000538840 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
CD163-207ENST00000538840 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
CD163-207ENST00000538840 ABCC9O60706 1549 aa25.17■■□□□ 1.62
CD163-207ENST00000538840 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
CD163-207ENST00000538840 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
CD163-207ENST00000538840 NACADO15069 1562 aa23.8■■□□□ 1.4
CD163-207ENST00000538840 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
CD163-207ENST00000538840 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
CD163-207ENST00000538840 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
CD163-207ENST00000538840 UNC13AQ9UPW8 1703 aa23.4■■□□□ 1.34
CD163-207ENST00000538840 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
CD163-207ENST00000538840 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
CD163-207ENST00000538840 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
CD163-207ENST00000538840 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
CD163-207ENST00000538840 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
CD163-207ENST00000538840 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
CD163-207ENST00000538840 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
CD163-207ENST00000538840 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
CD163-207ENST00000538840 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
CD163-207ENST00000538840 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
CD163-207ENST00000538840 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
CD163-207ENST00000538840 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
CD163-207ENST00000538840 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
CD163-207ENST00000538840 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
CD163-207ENST00000538840 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
CD163-207ENST00000538840 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
CD163-207ENST00000538840 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
CD163-207ENST00000538840 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
CD163-207ENST00000538840 NESP48681 1621 aa21.66■■□□□ 1.06
CD163-207ENST00000538840 CUX2O14529 1486 aa21.55■■□□□ 1.04
CD163-207ENST00000538840 WIZO95785 1651 aa21.53■■□□□ 1.04
CD163-207ENST00000538840 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
CD163-207ENST00000538840 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
CD163-207ENST00000538840 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
CD163-207ENST00000538840 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
CD163-207ENST00000538840 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
CD163-207ENST00000538840 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
CD163-207ENST00000538840 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
CD163-207ENST00000538840 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
CD163-207ENST00000538840 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
CD163-207ENST00000538840 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CD163-207ENST00000538840 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
CD163-207ENST00000538840 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
CD163-207ENST00000538840 CFTRP13569 1480 aa21.11■□□□□ 0.97
CD163-207ENST00000538840 WDR62O43379 1518 aa21.09■□□□□ 0.97
CD163-207ENST00000538840 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
CD163-207ENST00000538840 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
CD163-207ENST00000538840 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
CD163-207ENST00000538840 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
CD163-207ENST00000538840 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
CD163-207ENST00000538840 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
CD163-207ENST00000538840 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
CD163-207ENST00000538840 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
CD163-207ENST00000538840 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
CD163-207ENST00000538840 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
CD163-207ENST00000538840 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
CD163-207ENST00000538840 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
CD163-207ENST00000538840 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
CD163-207ENST00000538840 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
CD163-207ENST00000538840 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
CD163-207ENST00000538840 SOGA1O94964 1423 aa20.46■□□□□ 0.87
CD163-207ENST00000538840 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
CD163-207ENST00000538840 CUX1P39880 1505 aa20.43■□□□□ 0.86
CD163-207ENST00000538840 FBLN2P98095 1184 aa20.42■□□□□ 0.86
CD163-207ENST00000538840 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
CD163-207ENST00000538840 CHD1O14646 1710 aa20.36■□□□□ 0.85
CD163-207ENST00000538840 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
CD163-207ENST00000538840 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
CD163-207ENST00000538840 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
CD163-207ENST00000538840 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
CD163-207ENST00000538840 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
CD163-207ENST00000538840 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
CD163-207ENST00000538840 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
CD163-207ENST00000538840 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
CD163-207ENST00000538840 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
CD163-207ENST00000538840 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
CD163-207ENST00000538840 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
CD163-207ENST00000538840 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
CD163-207ENST00000538840 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
CD163-207ENST00000538840 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
CD163-207ENST00000538840 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
CD163-207ENST00000538840 SYNJ1O43426 1573 aa20.14■□□□□ 0.81
CD163-207ENST00000538840 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
CD163-207ENST00000538840 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
CD163-207ENST00000538840 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
CD163-207ENST00000538840 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
CD163-207ENST00000538840 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
CD163-207ENST00000538840 ADAMTS12P58397 1594 aa19.99■□□□□ 0.79
CD163-207ENST00000538840 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
CD163-207ENST00000538840 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
CD163-207ENST00000538840 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
CD163-207ENST00000538840 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
CD163-207ENST00000538840 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
CD163-207ENST00000538840 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
CD163-207ENST00000538840 NUP160Q12769 1436 aa19.88■□□□□ 0.77
CD163-207ENST00000538840 ERCC6L2Q5T890 1561 aa19.86■□□□□ 0.77
CD163-207ENST00000538840 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CD163-207ENST00000538840 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
CD163-207ENST00000538840 IGF1RP08069 1367 aa19.73■□□□□ 0.75
CD163-207ENST00000538840 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms