RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
C2CD3-212ENST00000538625 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
C2CD3-212ENST00000538625 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
C2CD3-212ENST00000538625 ABCC9O60706 1549 aa16.04■□□□□ 0.16
C2CD3-212ENST00000538625 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
C2CD3-212ENST00000538625 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
C2CD3-212ENST00000538625 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
C2CD3-212ENST00000538625 NACADO15069 1562 aa15.12■□□□□ 0.01
C2CD3-212ENST00000538625 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
C2CD3-212ENST00000538625 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
C2CD3-212ENST00000538625 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
C2CD3-212ENST00000538625 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.03
C2CD3-212ENST00000538625 BICRAQ9NZM4 1560 aa14.75□□□□□ -0.05
C2CD3-212ENST00000538625 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
C2CD3-212ENST00000538625 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
C2CD3-212ENST00000538625 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
C2CD3-212ENST00000538625 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
C2CD3-212ENST00000538625 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
C2CD3-212ENST00000538625 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
C2CD3-212ENST00000538625 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
C2CD3-212ENST00000538625 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
C2CD3-212ENST00000538625 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
C2CD3-212ENST00000538625 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
C2CD3-212ENST00000538625 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
C2CD3-212ENST00000538625 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
C2CD3-212ENST00000538625 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
C2CD3-212ENST00000538625 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
C2CD3-212ENST00000538625 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
C2CD3-212ENST00000538625 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
C2CD3-212ENST00000538625 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
C2CD3-212ENST00000538625 CUX2O14529 1486 aa13.81□□□□□ -0.2
C2CD3-212ENST00000538625 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
C2CD3-212ENST00000538625 NESP48681 1621 aa13.75□□□□□ -0.21
C2CD3-212ENST00000538625 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
C2CD3-212ENST00000538625 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.22
C2CD3-212ENST00000538625 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
C2CD3-212ENST00000538625 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
C2CD3-212ENST00000538625 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
C2CD3-212ENST00000538625 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
C2CD3-212ENST00000538625 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
C2CD3-212ENST00000538625 WIZO95785 1651 aa13.53□□□□□ -0.24
C2CD3-212ENST00000538625 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
C2CD3-212ENST00000538625 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
C2CD3-212ENST00000538625 FOXD1Q16676 465 aa13.42□□□□□ -0.26
C2CD3-212ENST00000538625 WDR62O43379 1518 aa13.41□□□□□ -0.26
C2CD3-212ENST00000538625 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
C2CD3-212ENST00000538625 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
C2CD3-212ENST00000538625 CFTRP13569 1480 aa13.38□□□□□ -0.27
C2CD3-212ENST00000538625 TOP2AP11388 1531 aaKnown RBP13.36□□□□□ -0.27
C2CD3-212ENST00000538625 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
C2CD3-212ENST00000538625 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
C2CD3-212ENST00000538625 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
C2CD3-212ENST00000538625 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
C2CD3-212ENST00000538625 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
C2CD3-212ENST00000538625 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
C2CD3-212ENST00000538625 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
C2CD3-212ENST00000538625 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
C2CD3-212ENST00000538625 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
C2CD3-212ENST00000538625 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
C2CD3-212ENST00000538625 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
C2CD3-212ENST00000538625 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
C2CD3-212ENST00000538625 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
C2CD3-212ENST00000538625 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.33
C2CD3-212ENST00000538625 FBLN2P98095 1184 aa13□□□□□ -0.33
C2CD3-212ENST00000538625 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
C2CD3-212ENST00000538625 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
C2CD3-212ENST00000538625 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
C2CD3-212ENST00000538625 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
C2CD3-212ENST00000538625 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
C2CD3-212ENST00000538625 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
C2CD3-212ENST00000538625 SOGA1O94964 1423 aa12.96□□□□□ -0.33
C2CD3-212ENST00000538625 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
C2CD3-212ENST00000538625 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
C2CD3-212ENST00000538625 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
C2CD3-212ENST00000538625 CHD1O14646 1710 aa12.93□□□□□ -0.34
C2CD3-212ENST00000538625 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
C2CD3-212ENST00000538625 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-212ENST00000538625 CUX1P39880 1505 aa12.88□□□□□ -0.35
C2CD3-212ENST00000538625 SNAPC4Q5SXM2 1469 aa12.86□□□□□ -0.35
C2CD3-212ENST00000538625 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
C2CD3-212ENST00000538625 GRIN2BQ13224 1484 aa12.84□□□□□ -0.35
C2CD3-212ENST00000538625 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-212ENST00000538625 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
C2CD3-212ENST00000538625 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
C2CD3-212ENST00000538625 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
C2CD3-212ENST00000538625 SYNJ2O15056 1496 aa12.79□□□□□ -0.36
C2CD3-212ENST00000538625 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
C2CD3-212ENST00000538625 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
C2CD3-212ENST00000538625 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
C2CD3-212ENST00000538625 ADRA2BP18089 450 aa12.75□□□□□ -0.37
C2CD3-212ENST00000538625 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
C2CD3-212ENST00000538625 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
C2CD3-212ENST00000538625 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
C2CD3-212ENST00000538625 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
C2CD3-212ENST00000538625 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
C2CD3-212ENST00000538625 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
C2CD3-212ENST00000538625 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
C2CD3-212ENST00000538625 FHAD1B1AJZ9 1412 aa12.63□□□□□ -0.39
C2CD3-212ENST00000538625 ADAMTS12P58397 1594 aa12.62□□□□□ -0.39
C2CD3-212ENST00000538625 NUP160Q12769 1436 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms