RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
C2CD3-211ENST00000538361 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
C2CD3-211ENST00000538361 ABCC9O60706 1549 aa28.76■■■□□ 2.19
C2CD3-211ENST00000538361 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
C2CD3-211ENST00000538361 NACADO15069 1562 aa27.48■■□□□ 1.99
C2CD3-211ENST00000538361 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
C2CD3-211ENST00000538361 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
C2CD3-211ENST00000538361 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
C2CD3-211ENST00000538361 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
C2CD3-211ENST00000538361 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
C2CD3-211ENST00000538361 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
C2CD3-211ENST00000538361 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
C2CD3-211ENST00000538361 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
C2CD3-211ENST00000538361 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
C2CD3-211ENST00000538361 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
C2CD3-211ENST00000538361 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
C2CD3-211ENST00000538361 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
C2CD3-211ENST00000538361 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
C2CD3-211ENST00000538361 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
C2CD3-211ENST00000538361 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
C2CD3-211ENST00000538361 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.65
C2CD3-211ENST00000538361 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
C2CD3-211ENST00000538361 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
C2CD3-211ENST00000538361 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
C2CD3-211ENST00000538361 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
C2CD3-211ENST00000538361 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
C2CD3-211ENST00000538361 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
C2CD3-211ENST00000538361 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
C2CD3-211ENST00000538361 WIZO95785 1651 aa24.85■■□□□ 1.57
C2CD3-211ENST00000538361 NESP48681 1621 aa24.79■■□□□ 1.56
C2CD3-211ENST00000538361 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
C2CD3-211ENST00000538361 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
C2CD3-211ENST00000538361 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
C2CD3-211ENST00000538361 CUX2O14529 1486 aa24.68■■□□□ 1.54
C2CD3-211ENST00000538361 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
C2CD3-211ENST00000538361 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
C2CD3-211ENST00000538361 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
C2CD3-211ENST00000538361 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
C2CD3-211ENST00000538361 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
C2CD3-211ENST00000538361 CFTRP13569 1480 aa24.38■■□□□ 1.49
C2CD3-211ENST00000538361 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
C2CD3-211ENST00000538361 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
C2CD3-211ENST00000538361 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
C2CD3-211ENST00000538361 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
C2CD3-211ENST00000538361 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
C2CD3-211ENST00000538361 WDR62O43379 1518 aa24.25■■□□□ 1.47
C2CD3-211ENST00000538361 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
C2CD3-211ENST00000538361 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
C2CD3-211ENST00000538361 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
C2CD3-211ENST00000538361 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
C2CD3-211ENST00000538361 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
C2CD3-211ENST00000538361 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
C2CD3-211ENST00000538361 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
C2CD3-211ENST00000538361 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
C2CD3-211ENST00000538361 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
C2CD3-211ENST00000538361 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
C2CD3-211ENST00000538361 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
C2CD3-211ENST00000538361 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
C2CD3-211ENST00000538361 CUX1P39880 1505 aa23.59■■□□□ 1.37
C2CD3-211ENST00000538361 SOGA1O94964 1423 aa23.59■■□□□ 1.37
C2CD3-211ENST00000538361 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
C2CD3-211ENST00000538361 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
C2CD3-211ENST00000538361 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
C2CD3-211ENST00000538361 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
C2CD3-211ENST00000538361 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
C2CD3-211ENST00000538361 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
C2CD3-211ENST00000538361 CHD1O14646 1710 aa23.38■■□□□ 1.33
C2CD3-211ENST00000538361 FBLN2P98095 1184 aa23.37■■□□□ 1.33
C2CD3-211ENST00000538361 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
C2CD3-211ENST00000538361 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
C2CD3-211ENST00000538361 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
C2CD3-211ENST00000538361 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
C2CD3-211ENST00000538361 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
C2CD3-211ENST00000538361 ABCA10Q8WWZ4 1543 aa23.32■■□□□ 1.32
C2CD3-211ENST00000538361 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
C2CD3-211ENST00000538361 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
C2CD3-211ENST00000538361 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
C2CD3-211ENST00000538361 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
C2CD3-211ENST00000538361 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
C2CD3-211ENST00000538361 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
C2CD3-211ENST00000538361 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
C2CD3-211ENST00000538361 RIMBP3CA6NJZ7 1639 aa23.23■■□□□ 1.31
C2CD3-211ENST00000538361 RIMBP3BA6NNM3 1639 aa23.23■■□□□ 1.31
C2CD3-211ENST00000538361 RIMBP3Q9UFD9 1639 aa23.23■■□□□ 1.31
C2CD3-211ENST00000538361 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
C2CD3-211ENST00000538361 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
C2CD3-211ENST00000538361 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
C2CD3-211ENST00000538361 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
C2CD3-211ENST00000538361 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
C2CD3-211ENST00000538361 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
C2CD3-211ENST00000538361 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
C2CD3-211ENST00000538361 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
C2CD3-211ENST00000538361 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
C2CD3-211ENST00000538361 NUP160Q12769 1436 aa22.92■■□□□ 1.26
C2CD3-211ENST00000538361 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
C2CD3-211ENST00000538361 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
C2CD3-211ENST00000538361 IGF1RP08069 1367 aa22.83■■□□□ 1.25
C2CD3-211ENST00000538361 CUL7Q14999 1698 aa22.81■■□□□ 1.24
C2CD3-211ENST00000538361 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
C2CD3-211ENST00000538361 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms