RNA–Protein interactions for RNA: ENST00000538356.1

GALNT9-206, Transcript of polypeptide N-acetylgalactosaminyltransferase 9, humanhuman

TSL 5

Gene GALNT9, Length 897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT9-206ENST00000538356 NISCHQ9Y2I1 1504 aa55.97■■■■■ 6.55
GALNT9-206ENST00000538356 CCDC180Q9P1Z9 1646 aa50.27■■■■■ 5.64
GALNT9-206ENST00000538356 ABCC9O60706 1549 aa50.2■■■■■ 5.63
GALNT9-206ENST00000538356 RB1CC1Q8TDY2 1594 aa47.92■■■■■ 5.26
GALNT9-206ENST00000538356 NACADO15069 1562 aa47.61■■■■■ 5.21
GALNT9-206ENST00000538356 DCAF8L2P0C7V8 631 aa47.4■■■■■ 5.18
GALNT9-206ENST00000538356 DNAJC5BQ9UF47 199 aa47■■■■■ 5.11
GALNT9-206ENST00000538356 MYO15BQ96JP2 1530 aa46.98■■■■■ 5.11
GALNT9-206ENST00000538356 PABPN1Q86U42 306 aaKnown RBP eCLIP46.75■■■■■ 5.07
GALNT9-206ENST00000538356 UNC13AQ9UPW8 1703 aa46.56■■■■■ 5.04
GALNT9-206ENST00000538356 ZCCHC6Q5VYS8 1495 aaKnown RBP46.34■■■■■ 5.01
GALNT9-206ENST00000538356 DCAF1Q9Y4B6 1507 aa46.33■■■■■ 5.01
GALNT9-206ENST00000538356 BICRAQ9NZM4 1560 aa46.29■■■■■ 5
GALNT9-206ENST00000538356 SHROOM4Q9ULL8 1493 aa46■■■■■ 4.95
GALNT9-206ENST00000538356 SCRIBQ14160 1630 aa45.68■■■■■ 4.9
GALNT9-206ENST00000538356 CC2D2AQ9P2K1 1620 aa45.35■■■■■ 4.85
GALNT9-206ENST00000538356 CECR2Q9BXF3 1484 aa45.3■■■■■ 4.84
GALNT9-206ENST00000538356 EIF4G1Q04637 1599 aaKnown RBP45.27■■■■■ 4.84
GALNT9-206ENST00000538356 NCAPD3P42695 1498 aa43.92■■■■■ 4.62
GALNT9-206ENST00000538356 ATAD2BQ9ULI0 1458 aa43.71■■■■■ 4.59
GALNT9-206ENST00000538356 SMARCA2P51531 1590 aa43.7■■■■■ 4.59
GALNT9-206ENST00000538356 SMARCA4P51532 1647 aa43.62■■■■■ 4.57
GALNT9-206ENST00000538356 HMGXB3Q12766 1538 aa43.57■■■■■ 4.56
GALNT9-206ENST00000538356 BAZ1AQ9NRL2 1556 aaPredicted RBP43.53■■■■■ 4.56
GALNT9-206ENST00000538356 ERCC6Q03468 1493 aa43.51■■■■■ 4.56
GALNT9-206ENST00000538356 CUX2O14529 1486 aa43.44■■■■■ 4.54
GALNT9-206ENST00000538356 DNAJC5Q9H3Z4 198 aa43.42■■■■■ 4.54
GALNT9-206ENST00000538356 BAZ1BQ9UIG0 1483 aaKnown RBP43.35■■■■■ 4.53
GALNT9-206ENST00000538356 PEG3Q9GZU2 1588 aa43.25■■■■■ 4.51
GALNT9-206ENST00000538356 NESP48681 1621 aa43.04■■■■■ 4.48
GALNT9-206ENST00000538356 MROH2BQ7Z745 1585 aa43.03■■■■■ 4.48
GALNT9-206ENST00000538356 LAMC3Q9Y6N6 1575 aa42.95■■■■■ 4.47
GALNT9-206ENST00000538356 PDS5BQ9NTI5 1447 aa42.8■■■■■ 4.44
GALNT9-206ENST00000538356 THOC2Q8NI27 1593 aaKnown RBP42.62■■■■■ 4.41
GALNT9-206ENST00000538356 CADPSQ9ULU8 1353 aa42.61■■■■■ 4.41
GALNT9-206ENST00000538356 WIZO95785 1651 aa42.5■■■■■ 4.39
GALNT9-206ENST00000538356 KIF21AQ7Z4S6 1674 aa42.48■■■■■ 4.39
GALNT9-206ENST00000538356 MRC2Q9UBG0 1479 aa42.3■■■■■ 4.36
GALNT9-206ENST00000538356 RSF1Q96T23 1441 aaPredicted RBP42.2■■■■■ 4.35
GALNT9-206ENST00000538356 CEP164Q9UPV0 1460 aa42.16■■■■■ 4.34
GALNT9-206ENST00000538356 WDR62O43379 1518 aa42.14■■■■■ 4.34
GALNT9-206ENST00000538356 TOP2AP11388 1531 aaKnown RBP42.07■■■■■ 4.33
GALNT9-206ENST00000538356 CFTRP13569 1480 aa42.07■■■■■ 4.33
GALNT9-206ENST00000538356 FANCD2Q9BXW9 1451 aa42.07■■■■■ 4.33
GALNT9-206ENST00000538356 URB2Q14146 1524 aaKnown RBP41.61■■■■■ 4.25
GALNT9-206ENST00000538356 CCDC88BA6NC98 1476 aa41.58■■■■■ 4.25
GALNT9-206ENST00000538356 PRDM2Q13029 1718 aa41.58■■■■■ 4.25
GALNT9-206ENST00000538356 OSCARQ8IYS5 282 aa41.55■■■■■ 4.24
GALNT9-206ENST00000538356 TRIM41Q8WV44 630 aa41.47■■■■■ 4.23
GALNT9-206ENST00000538356 ABCC8Q09428 1581 aa41.38■■■■■ 4.22
GALNT9-206ENST00000538356 IFT140Q96RY7 1462 aa41.34■■■■■ 4.21
GALNT9-206ENST00000538356 TOPBP1Q92547 1522 aa41.23■■■■■ 4.19
GALNT9-206ENST00000538356 DNMBPQ6XZF7 1577 aa41.11■■■■■ 4.17
GALNT9-206ENST00000538356 ZNF608Q9ULD9 1512 aaPredicted RBP41.08■■■■■ 4.17
GALNT9-206ENST00000538356 SUPT5HO00267 1087 aaKnown RBP41.06■■■■■ 4.16
GALNT9-206ENST00000538356 EIF4G3O43432 1585 aaKnown RBP40.89■■■■■ 4.14
GALNT9-206ENST00000538356 TARBP1Q13395 1621 aaKnown RBP40.8■■■■■ 4.12
GALNT9-206ENST00000538356 POLA1P09884 1462 aaPredicted RBP40.79■■■■■ 4.12
GALNT9-206ENST00000538356 AQRO60306 1485 aaKnown RBP eCLIP40.78■■■■■ 4.12
GALNT9-206ENST00000538356 RIMBP3CA6NJZ7 1639 aa40.75■■■■■ 4.11
GALNT9-206ENST00000538356 RIMBP3BA6NNM3 1639 aa40.75■■■■■ 4.11
GALNT9-206ENST00000538356 RIMBP3Q9UFD9 1639 aa40.75■■■■■ 4.11
GALNT9-206ENST00000538356 SOGA1O94964 1423 aa40.73■■■■■ 4.11
GALNT9-206ENST00000538356 FBLN2P98095 1184 aa40.69■■■■■ 4.1
GALNT9-206ENST00000538356 ARHGEF11O15085 1522 aa40.66■■■■■ 4.1
GALNT9-206ENST00000538356 WDR97A6NE52 1622 aa40.6■■■■■ 4.09
GALNT9-206ENST00000538356 RAD54L2Q9Y4B4 1467 aa40.59■■■■■ 4.09
GALNT9-206ENST00000538356 TDRD9Q8NDG6 1382 aaKnown RBP40.57■■■■■ 4.08
GALNT9-206ENST00000538356 CHD1O14646 1710 aa40.55■■■■■ 4.08
GALNT9-206ENST00000538356 FGD5Q6ZNL6 1462 aa40.54■■■■■ 4.08
GALNT9-206ENST00000538356 CYB5RLQ6IPT4 315 aa40.48■■■■■ 4.07
GALNT9-206ENST00000538356 CUX1P39880 1505 aa40.44■■■■■ 4.06
GALNT9-206ENST00000538356 CHMP7Q8WUX9 453 aaPredicted RBP40.44■■■■■ 4.06
GALNT9-206ENST00000538356 MAGI1Q96QZ7 1491 aaPredicted RBP40.39■■■■■ 4.06
GALNT9-206ENST00000538356 GRIN2BQ13224 1484 aa40.38■■■■■ 4.05
GALNT9-206ENST00000538356 SNAPC4Q5SXM2 1469 aa40.38■■■■■ 4.05
GALNT9-206ENST00000538356 SYNJ1O43426 1573 aa40.27■■■■■ 4.04
GALNT9-206ENST00000538356 SYNJ2O15056 1496 aa40.23■■■■■ 4.03
GALNT9-206ENST00000538356 GAPVD1Q14C86 1478 aa40.2■■■■■ 4.03
GALNT9-206ENST00000538356 ARAP1Q96P48 1450 aa40.2■■■■■ 4.03
GALNT9-206ENST00000538356 ABCA10Q8WWZ4 1543 aa40.14■■■■■ 4.02
GALNT9-206ENST00000538356 CLASP1Q7Z460 1538 aa40.12■■■■■ 4.01
GALNT9-206ENST00000538356 TRHP20396 242 aaPredicted RBP40.12■■■■■ 4.01
GALNT9-206ENST00000538356 WRNQ14191 1432 aaPredicted RBP eCLIP40.08■■■■■ 4.01
GALNT9-206ENST00000538356 PBRM1Q86U86 1689 aa40.05■■■■■ 4
GALNT9-206ENST00000538356 ABCA5Q8WWZ7 1642 aa39.98■■■■□ 3.99
GALNT9-206ENST00000538356 TOP2BQ02880 1626 aa39.87■■■■□ 3.97
GALNT9-206ENST00000538356 BIVM-ERCC5R4GMW8 1640 aa39.83■■■■□ 3.97
GALNT9-206ENST00000538356 GRIN2AQ12879 1464 aa39.79■■■■□ 3.96
GALNT9-206ENST00000538356 FHAD1B1AJZ9 1412 aa39.74■■■■□ 3.95
GALNT9-206ENST00000538356 ADAMTS12P58397 1594 aa39.68■■■■□ 3.94
GALNT9-206ENST00000538356 ERICH3Q5RHP9 1530 aa39.68■■■■□ 3.94
GALNT9-206ENST00000538356 NUP160Q12769 1436 aa39.65■■■■□ 3.94
GALNT9-206ENST00000538356 CEP170Q5SW79 1584 aa39.54■■■■□ 3.92
GALNT9-206ENST00000538356 SHROOM2Q13796 1616 aa39.42■■■■□ 3.9
GALNT9-206ENST00000538356 JPH4Q96JJ6 628 aa39.37■■■■□ 3.89
GALNT9-206ENST00000538356 ERCC6L2Q5T890 1561 aa39.37■■■■□ 3.89
GALNT9-206ENST00000538356 PRG4Q92954 1404 aaPredicted RBP39.31■■■■□ 3.88
GALNT9-206ENST00000538356 KIF27Q86VH2 1401 aa39.23■■■■□ 3.87
GALNT9-206ENST00000538356 NPM1P06748 294 aaKnown RBP eCLIP39.17■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms