RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 SF3B4Q15427 424 aaKnown RBP eCLIP25.91■■□□□ 1.744e-21■■□□□ 14.5
LINC01089-207ENST00000538335 EFTUD2Q15029 972 aaKnown RBP eCLIP26.4■■□□□ 1.826e-17■■□□□ 13.4
LINC01089-207ENST00000538335 TIA1P31483 386 aaKnown RBP eCLIP25.84■■□□□ 1.737e-12■■■■■ 28.2
LINC01089-207ENST00000538335 PPIGQ13427 754 aaKnown RBP eCLIP32.9■■■□□ 2.866e-11■■□□□ 11.6
LINC01089-207ENST00000538335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.59■■■■■ 4.572e-10■□□□□ 10.5
LINC01089-207ENST00000538335 NCBP2P52298 156 aaKnown RBP eCLIP25.73■■□□□ 1.713e-10■■■□□ 15.9
LINC01089-207ENST00000538335 SF3A3Q12874 501 aaKnown RBP eCLIP24.33■■□□□ 1.496e-10■□□□□ 10.5
LINC01089-207ENST00000538335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.41■■■□□ 2.142e-9■■□□□ 11.8
LINC01089-207ENST00000538335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.39■■■□□ 2.943e-9■■■■■ 71.4
LINC01089-207ENST00000538335 GTF2F1P35269 517 aaKnown RBP eCLIP31.53■■■□□ 2.641e-8■■■■■ 39.8
LINC01089-207ENST00000538335 U2AF2P26368 475 aaKnown RBP eCLIP31.29■■■□□ 2.61e-8■■■■□ 19.9
LINC01089-207ENST00000538335 RBM22Q9NW64 420 aaKnown RBP eCLIP28.23■■■□□ 2.112e-8■■■■□ 26.3
LINC01089-207ENST00000538335 TIAL1Q01085 375 aaKnown RBP eCLIP26.78■■□□□ 1.883e-8■■■□□ 16.2
LINC01089-207ENST00000538335 QKIQ96PU8 341 aaKnown RBP eCLIP27.88■■■□□ 2.053e-8■□□□□ 10.2
LINC01089-207ENST00000538335 AATFQ9NY61 560 aaKnown RBP eCLIP34.49■■■■□ 3.114e-8■■■■■ 41
LINC01089-207ENST00000538335 SMNDC1O75940 238 aaKnown RBP eCLIP25.47■■□□□ 1.676e-8■■■■□ 20.7
LINC01089-207ENST00000538335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.86■■■□□ 2.376e-8■■■■■ 43.3
LINC01089-207ENST00000538335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.27■■■□□ 2.289e-8■■■□□ 16.5
LINC01089-207ENST00000538335 KHSRPQ92945 711 aaKnown RBP eCLIP31.42■■■□□ 2.621e-7■□□□□ 11.3
LINC01089-207ENST00000538335 SRSF7Q16629 238 aaKnown RBP eCLIP21.89■■□□□ 1.091e-7■■■□□ 15.9
LINC01089-207ENST00000538335 NKRFO15226 690 aaKnown RBP eCLIP32.93■■■□□ 2.862e-7■■□□□ 12.6
LINC01089-207ENST00000538335 RBM15Q96T37 977 aaKnown RBP eCLIP28.31■■■□□ 2.122e-7■□□□□ 9.6
LINC01089-207ENST00000538335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.47■■■□□ 2.953e-7■□□□□ 10.1
LINC01089-207ENST00000538335 NONOQ15233 471 aaKnown RBP eCLIP31.88■■■□□ 2.693e-7■■■■□ 19.8
LINC01089-207ENST00000538335 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.9■■■■□ 3.024e-7■■■□□ 15.6
LINC01089-207ENST00000538335 LSM11P83369 360 aaKnown RBP eCLIP24.47■■□□□ 1.517e-7■■■■■ 27.6
LINC01089-207ENST00000538335 PRPF4O43172 522 aaKnown RBP eCLIP26.99■■□□□ 1.918e-7■■□□□ 12.1
LINC01089-207ENST00000538335 SF3B1O75533 1304 aaKnown RBP eCLIP31.09■■■□□ 2.571e-6■■■■■ 67.5
LINC01089-207ENST00000538335 SRSF1Q07955 248 aaKnown RBP eCLIP26.89■■□□□ 1.91e-6■□□□□ 8.4
LINC01089-207ENST00000538335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.69■■□□□ 1.861e-6■■□□□ 13.5
LINC01089-207ENST00000538335 U2AF1Q01081 240 aaKnown RBP eCLIP37.74■■■■□ 3.632e-6■■□□□ 11.9
LINC01089-207ENST00000538335 PHF6Q8IWS0 365 aaKnown RBP eCLIP32.51■■■□□ 2.792e-6■■■□□ 17
LINC01089-207ENST00000538335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.06■■■■■ 4.962e-6■■■■□ 21.1
LINC01089-207ENST00000538335 LARP4Q71RC2 724 aaKnown RBP eCLIP25.74■■□□□ 1.712e-6■■■■□ 23.7
LINC01089-207ENST00000538335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.56■■■■■ 4.563e-6■■□□□ 12.8
LINC01089-207ENST00000538335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.74■■■□□ 2.353e-6■■□□□ 12.5
LINC01089-207ENST00000538335 PCBP2Q15366 365 aaKnown RBP eCLIP26.25■■□□□ 1.793e-6■■■■□ 25.7
LINC01089-207ENST00000538335 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.36■■■□□ 2.293e-6■■□□□ 13.3
LINC01089-207ENST00000538335 ZNF622Q969S3 477 aaKnown RBP eCLIP37.14■■■■□ 3.543e-6■□□□□ 10.4
LINC01089-207ENST00000538335 DDX6P26196 483 aaKnown RBP eCLIP30.31■■■□□ 2.443e-6■□□□□ 10
LINC01089-207ENST00000538335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.12■■■□□ 2.254e-6■□□□□ 10.6
LINC01089-207ENST00000538335 EWSR1Q01844 656 aaKnown RBP eCLIP20.73■□□□□ 0.914e-6■■□□□ 12.8
LINC01089-207ENST00000538335 RBFOX2O43251 390 aaKnown RBP eCLIP21.53■■□□□ 1.045e-6■■□□□ 12.1
LINC01089-207ENST00000538335 RBM5P52756 815 aaKnown RBP eCLIP35.33■■■■□ 3.258e-6■■■■□ 20.7
Retrieved 44 of 44 RNA–protein pairs in 11 ms