RNA–Protein interactions for RNA: ENST00000538233.1

AP001880.2-201, humanhuman

BASIC

Gene AP001880.2, Length 448 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001880.2-201ENST00000538233 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
AP001880.2-201ENST00000538233 AEBP2Q6ZN18 517 aaPredicted RBP10.66□□□□□ -0.7
AP001880.2-201ENST00000538233 CCDC180Q9P1Z9 1646 aa10.49□□□□□ -0.73
AP001880.2-201ENST00000538233 ABCC9O60706 1549 aa10.42□□□□□ -0.74
AP001880.2-201ENST00000538233 CHIC1Q5VXU3 224 aa10.23□□□□□ -0.77
AP001880.2-201ENST00000538233 DCAF8L2P0C7V8 631 aa10□□□□□ -0.81
AP001880.2-201ENST00000538233 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
AP001880.2-201ENST00000538233 NACADO15069 1562 aa9.88□□□□□ -0.83
AP001880.2-201ENST00000538233 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
AP001880.2-201ENST00000538233 UNC13AQ9UPW8 1703 aa9.77□□□□□ -0.85
AP001880.2-201ENST00000538233 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
AP001880.2-201ENST00000538233 MYO15BQ96JP2 1530 aa9.74□□□□□ -0.85
AP001880.2-201ENST00000538233 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
AP001880.2-201ENST00000538233 SCRIBQ14160 1630 aa9.65□□□□□ -0.86
AP001880.2-201ENST00000538233 BICRAQ9NZM4 1560 aa9.65□□□□□ -0.86
AP001880.2-201ENST00000538233 DNAJC5BQ9UF47 199 aa9.64□□□□□ -0.87
AP001880.2-201ENST00000538233 SHROOM4Q9ULL8 1493 aa9.44□□□□□ -0.9
AP001880.2-201ENST00000538233 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.9
AP001880.2-201ENST00000538233 EIF4G1Q04637 1599 aaKnown RBP9.4□□□□□ -0.9
AP001880.2-201ENST00000538233 CECR2Q9BXF3 1484 aa9.34□□□□□ -0.91
AP001880.2-201ENST00000538233 SMARCA4P51532 1647 aa9.18□□□□□ -0.94
AP001880.2-201ENST00000538233 BAZ1AQ9NRL2 1556 aaPredicted RBP9.14□□□□□ -0.95
AP001880.2-201ENST00000538233 ATAD2BQ9ULI0 1458 aa9.14□□□□□ -0.95
AP001880.2-201ENST00000538233 MROH2BQ7Z745 1585 aa9.12□□□□□ -0.95
AP001880.2-201ENST00000538233 NCAPD3P42695 1498 aa9.11□□□□□ -0.95
AP001880.2-201ENST00000538233 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
AP001880.2-201ENST00000538233 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
AP001880.2-201ENST00000538233 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
AP001880.2-201ENST00000538233 WIZO95785 1651 aa9.05□□□□□ -0.96
AP001880.2-201ENST00000538233 PEG3Q9GZU2 1588 aa9.04□□□□□ -0.96
AP001880.2-201ENST00000538233 PHF23Q9BUL5 403 aaPredicted RBP9.02□□□□□ -0.97
AP001880.2-201ENST00000538233 SENP3Q9H4L4 574 aaPredicted RBP9□□□□□ -0.97
AP001880.2-201ENST00000538233 NESP48681 1621 aa9□□□□□ -0.97
AP001880.2-201ENST00000538233 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
AP001880.2-201ENST00000538233 ERCC6Q03468 1493 aa8.96□□□□□ -0.97
AP001880.2-201ENST00000538233 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.99
AP001880.2-201ENST00000538233 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
AP001880.2-201ENST00000538233 TOP2AP11388 1531 aaKnown RBP8.89□□□□□ -0.99
AP001880.2-201ENST00000538233 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
AP001880.2-201ENST00000538233 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
AP001880.2-201ENST00000538233 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
AP001880.2-201ENST00000538233 CUX2O14529 1486 aa8.83□□□□□ -1
AP001880.2-201ENST00000538233 CCDC88BA6NC98 1476 aa8.81□□□□□ -1
AP001880.2-201ENST00000538233 CFTRP13569 1480 aa8.79□□□□□ -1
AP001880.2-201ENST00000538233 FANCD2Q9BXW9 1451 aa8.78□□□□□ -1
AP001880.2-201ENST00000538233 SUPT5HO00267 1087 aaKnown RBP8.78□□□□□ -1
AP001880.2-201ENST00000538233 MRC2Q9UBG0 1479 aa8.77□□□□□ -1.01
AP001880.2-201ENST00000538233 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
AP001880.2-201ENST00000538233 PRDM2Q13029 1718 aa8.75□□□□□ -1.01
AP001880.2-201ENST00000538233 WDR62O43379 1518 aa8.74□□□□□ -1.01
AP001880.2-201ENST00000538233 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
AP001880.2-201ENST00000538233 DNAJC5Q9H3Z4 198 aa8.69□□□□□ -1.02
AP001880.2-201ENST00000538233 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
AP001880.2-201ENST00000538233 DNMBPQ6XZF7 1577 aa8.61□□□□□ -1.03
AP001880.2-201ENST00000538233 ZNF608Q9ULD9 1512 aaPredicted RBP8.59□□□□□ -1.03
AP001880.2-201ENST00000538233 ABCC8Q09428 1581 aa8.58□□□□□ -1.04
AP001880.2-201ENST00000538233 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
AP001880.2-201ENST00000538233 POLA1P09884 1462 aaPredicted RBP8.56□□□□□ -1.04
AP001880.2-201ENST00000538233 RAD54L2Q9Y4B4 1467 aa8.56□□□□□ -1.04
AP001880.2-201ENST00000538233 CUX1P39880 1505 aa8.55□□□□□ -1.04
AP001880.2-201ENST00000538233 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
AP001880.2-201ENST00000538233 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
AP001880.2-201ENST00000538233 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
AP001880.2-201ENST00000538233 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
AP001880.2-201ENST00000538233 SOGA1O94964 1423 aa8.53□□□□□ -1.04
AP001880.2-201ENST00000538233 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
AP001880.2-201ENST00000538233 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
AP001880.2-201ENST00000538233 FBLN2P98095 1184 aa8.48□□□□□ -1.05
AP001880.2-201ENST00000538233 CHD1O14646 1710 aa8.48□□□□□ -1.05
AP001880.2-201ENST00000538233 SYNJ1O43426 1573 aa8.47□□□□□ -1.05
AP001880.2-201ENST00000538233 WRNQ14191 1432 aaPredicted RBP eCLIP8.46□□□□□ -1.05
AP001880.2-201ENST00000538233 WDR97A6NE52 1622 aa8.46□□□□□ -1.06
AP001880.2-201ENST00000538233 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
AP001880.2-201ENST00000538233 TOP2BQ02880 1626 aa8.44□□□□□ -1.06
AP001880.2-201ENST00000538233 BIVM-ERCC5R4GMW8 1640 aa8.44□□□□□ -1.06
AP001880.2-201ENST00000538233 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
AP001880.2-201ENST00000538233 PBRM1Q86U86 1689 aa8.43□□□□□ -1.06
AP001880.2-201ENST00000538233 FOXD1Q16676 465 aa8.42□□□□□ -1.06
AP001880.2-201ENST00000538233 GAPVD1Q14C86 1478 aa8.42□□□□□ -1.06
AP001880.2-201ENST00000538233 ABCA10Q8WWZ4 1543 aa8.41□□□□□ -1.06
AP001880.2-201ENST00000538233 GRIN2BQ13224 1484 aa8.41□□□□□ -1.06
AP001880.2-201ENST00000538233 CHMP7Q8WUX9 453 aaPredicted RBP8.41□□□□□ -1.06
AP001880.2-201ENST00000538233 ABCA5Q8WWZ7 1642 aa8.4□□□□□ -1.06
AP001880.2-201ENST00000538233 RIMBP3CA6NJZ7 1639 aa8.39□□□□□ -1.07
AP001880.2-201ENST00000538233 RIMBP3BA6NNM3 1639 aa8.39□□□□□ -1.07
AP001880.2-201ENST00000538233 RIMBP3Q9UFD9 1639 aa8.39□□□□□ -1.07
AP001880.2-201ENST00000538233 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
AP001880.2-201ENST00000538233 SYNJ2O15056 1496 aa8.37□□□□□ -1.07
AP001880.2-201ENST00000538233 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
AP001880.2-201ENST00000538233 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
AP001880.2-201ENST00000538233 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
AP001880.2-201ENST00000538233 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
AP001880.2-201ENST00000538233 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
AP001880.2-201ENST00000538233 ERICH3Q5RHP9 1530 aa8.3□□□□□ -1.08
AP001880.2-201ENST00000538233 ARAP1Q96P48 1450 aa8.3□□□□□ -1.08
AP001880.2-201ENST00000538233 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
AP001880.2-201ENST00000538233 FHAD1B1AJZ9 1412 aa8.29□□□□□ -1.08
AP001880.2-201ENST00000538233 KIF27Q86VH2 1401 aa8.28□□□□□ -1.08
AP001880.2-201ENST00000538233 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
AP001880.2-201ENST00000538233 IGF1RP08069 1367 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms