RNA–Protein interactions for RNA: ENST00000537954.5

PGA3-203, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-203ENST00000537954 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
PGA3-203ENST00000537954 ABCC9O60706 1549 aa36.64■■■■□ 3.46
PGA3-203ENST00000537954 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
PGA3-203ENST00000537954 RB1CC1Q8TDY2 1594 aa34.8■■■■□ 3.16
PGA3-203ENST00000537954 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
PGA3-203ENST00000537954 NACADO15069 1562 aa34.56■■■■□ 3.12
PGA3-203ENST00000537954 DCAF8L2P0C7V8 631 aa34.38■■■■□ 3.09
PGA3-203ENST00000537954 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
PGA3-203ENST00000537954 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
PGA3-203ENST00000537954 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.03
PGA3-203ENST00000537954 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
PGA3-203ENST00000537954 BICRAQ9NZM4 1560 aa33.83■■■■□ 3.01
PGA3-203ENST00000537954 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
PGA3-203ENST00000537954 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
PGA3-203ENST00000537954 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
PGA3-203ENST00000537954 CC2D2AQ9P2K1 1620 aa33.08■■■□□ 2.89
PGA3-203ENST00000537954 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
PGA3-203ENST00000537954 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
PGA3-203ENST00000537954 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
PGA3-203ENST00000537954 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
PGA3-203ENST00000537954 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
PGA3-203ENST00000537954 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
PGA3-203ENST00000537954 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
PGA3-203ENST00000537954 CUX2O14529 1486 aa31.65■■■□□ 2.66
PGA3-203ENST00000537954 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
PGA3-203ENST00000537954 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
PGA3-203ENST00000537954 BAZ1AQ9NRL2 1556 aaPredicted RBP31.54■■■□□ 2.64
PGA3-203ENST00000537954 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
PGA3-203ENST00000537954 NESP48681 1621 aa31.46■■■□□ 2.63
PGA3-203ENST00000537954 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
PGA3-203ENST00000537954 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
PGA3-203ENST00000537954 LAMC3Q9Y6N6 1575 aa31.19■■■□□ 2.58
PGA3-203ENST00000537954 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
PGA3-203ENST00000537954 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
PGA3-203ENST00000537954 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
PGA3-203ENST00000537954 CADPSQ9ULU8 1353 aa30.99■■■□□ 2.55
PGA3-203ENST00000537954 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
PGA3-203ENST00000537954 WIZO95785 1651 aa30.93■■■□□ 2.54
PGA3-203ENST00000537954 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
PGA3-203ENST00000537954 WDR62O43379 1518 aa30.69■■■□□ 2.5
PGA3-203ENST00000537954 CFTRP13569 1480 aa30.6■■■□□ 2.49
PGA3-203ENST00000537954 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
PGA3-203ENST00000537954 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
PGA3-203ENST00000537954 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
PGA3-203ENST00000537954 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
PGA3-203ENST00000537954 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
PGA3-203ENST00000537954 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
PGA3-203ENST00000537954 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
PGA3-203ENST00000537954 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
PGA3-203ENST00000537954 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
PGA3-203ENST00000537954 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
PGA3-203ENST00000537954 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.39
PGA3-203ENST00000537954 TOPBP1Q92547 1522 aa29.99■■■□□ 2.39
PGA3-203ENST00000537954 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
PGA3-203ENST00000537954 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
PGA3-203ENST00000537954 RIMBP3CA6NJZ7 1639 aa29.76■■■□□ 2.35
PGA3-203ENST00000537954 RIMBP3BA6NNM3 1639 aa29.76■■■□□ 2.35
PGA3-203ENST00000537954 RIMBP3Q9UFD9 1639 aa29.76■■■□□ 2.35
PGA3-203ENST00000537954 EIF4G3O43432 1585 aaKnown RBP29.76■■■□□ 2.35
PGA3-203ENST00000537954 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
PGA3-203ENST00000537954 TARBP1Q13395 1621 aaKnown RBP29.73■■■□□ 2.35
PGA3-203ENST00000537954 ARHGEF11O15085 1522 aa29.68■■■□□ 2.34
PGA3-203ENST00000537954 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
PGA3-203ENST00000537954 RAD54L2Q9Y4B4 1467 aa29.59■■■□□ 2.33
PGA3-203ENST00000537954 SOGA1O94964 1423 aa29.57■■■□□ 2.32
PGA3-203ENST00000537954 FBLN2P98095 1184 aa29.54■■■□□ 2.32
PGA3-203ENST00000537954 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
PGA3-203ENST00000537954 CYB5RLQ6IPT4 315 aa29.53■■■□□ 2.32
PGA3-203ENST00000537954 CHD1O14646 1710 aa29.52■■■□□ 2.32
PGA3-203ENST00000537954 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
PGA3-203ENST00000537954 CUX1P39880 1505 aa29.43■■■□□ 2.3
PGA3-203ENST00000537954 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
PGA3-203ENST00000537954 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
PGA3-203ENST00000537954 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
PGA3-203ENST00000537954 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
PGA3-203ENST00000537954 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
PGA3-203ENST00000537954 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
PGA3-203ENST00000537954 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
PGA3-203ENST00000537954 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
PGA3-203ENST00000537954 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
PGA3-203ENST00000537954 SYNJ1O43426 1573 aa29.2■■■□□ 2.26
PGA3-203ENST00000537954 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
PGA3-203ENST00000537954 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
PGA3-203ENST00000537954 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
PGA3-203ENST00000537954 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
PGA3-203ENST00000537954 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
PGA3-203ENST00000537954 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
PGA3-203ENST00000537954 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
PGA3-203ENST00000537954 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
PGA3-203ENST00000537954 NUP160Q12769 1436 aa28.86■■■□□ 2.21
PGA3-203ENST00000537954 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
PGA3-203ENST00000537954 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
PGA3-203ENST00000537954 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
PGA3-203ENST00000537954 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
PGA3-203ENST00000537954 ERICH3Q5RHP9 1530 aa28.76■■■□□ 2.19
PGA3-203ENST00000537954 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
PGA3-203ENST00000537954 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
PGA3-203ENST00000537954 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
PGA3-203ENST00000537954 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
PGA3-203ENST00000537954 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms