RNA–Protein interactions for RNA: ENST00000537895.5

ACSF3-209, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 4

Gene ACSF3, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-209ENST00000537895 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
ACSF3-209ENST00000537895 ABCC9O60706 1549 aa18.63■□□□□ 0.57
ACSF3-209ENST00000537895 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
ACSF3-209ENST00000537895 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
ACSF3-209ENST00000537895 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
ACSF3-209ENST00000537895 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
ACSF3-209ENST00000537895 NACADO15069 1562 aa17.39■□□□□ 0.37
ACSF3-209ENST00000537895 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
ACSF3-209ENST00000537895 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
ACSF3-209ENST00000537895 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
ACSF3-209ENST00000537895 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
ACSF3-209ENST00000537895 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
ACSF3-209ENST00000537895 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
ACSF3-209ENST00000537895 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
ACSF3-209ENST00000537895 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
ACSF3-209ENST00000537895 SCRIBQ14160 1630 aa16.77■□□□□ 0.27
ACSF3-209ENST00000537895 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
ACSF3-209ENST00000537895 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
ACSF3-209ENST00000537895 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
ACSF3-209ENST00000537895 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
ACSF3-209ENST00000537895 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
ACSF3-209ENST00000537895 CUX2O14529 1486 aa16.05■□□□□ 0.16
ACSF3-209ENST00000537895 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
ACSF3-209ENST00000537895 SMARCA2P51531 1590 aa15.96■□□□□ 0.14
ACSF3-209ENST00000537895 NESP48681 1621 aa15.93■□□□□ 0.14
ACSF3-209ENST00000537895 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
ACSF3-209ENST00000537895 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
ACSF3-209ENST00000537895 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
ACSF3-209ENST00000537895 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
ACSF3-209ENST00000537895 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
ACSF3-209ENST00000537895 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
ACSF3-209ENST00000537895 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.11
ACSF3-209ENST00000537895 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
ACSF3-209ENST00000537895 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
ACSF3-209ENST00000537895 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
ACSF3-209ENST00000537895 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
ACSF3-209ENST00000537895 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
ACSF3-209ENST00000537895 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
ACSF3-209ENST00000537895 WIZO95785 1651 aa15.5■□□□□ 0.07
ACSF3-209ENST00000537895 WDR62O43379 1518 aa15.48■□□□□ 0.07
ACSF3-209ENST00000537895 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
ACSF3-209ENST00000537895 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
ACSF3-209ENST00000537895 CFTRP13569 1480 aa15.39■□□□□ 0.05
ACSF3-209ENST00000537895 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
ACSF3-209ENST00000537895 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
ACSF3-209ENST00000537895 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
ACSF3-209ENST00000537895 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
ACSF3-209ENST00000537895 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
ACSF3-209ENST00000537895 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
ACSF3-209ENST00000537895 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
ACSF3-209ENST00000537895 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
ACSF3-209ENST00000537895 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
ACSF3-209ENST00000537895 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
ACSF3-209ENST00000537895 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
ACSF3-209ENST00000537895 FBLN2P98095 1184 aa15.07■□□□□ 0
ACSF3-209ENST00000537895 ARHGEF11O15085 1522 aa15.07■□□□□ 0
ACSF3-209ENST00000537895 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
ACSF3-209ENST00000537895 ABCC8Q09428 1581 aa15.06■□□□□ 0
ACSF3-209ENST00000537895 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -06e-6■■■■□ 23.2
ACSF3-209ENST00000537895 PRDM2Q13029 1718 aa15.03■□□□□ -0
ACSF3-209ENST00000537895 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
ACSF3-209ENST00000537895 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
ACSF3-209ENST00000537895 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
ACSF3-209ENST00000537895 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
ACSF3-209ENST00000537895 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
ACSF3-209ENST00000537895 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
ACSF3-209ENST00000537895 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
ACSF3-209ENST00000537895 SOGA1O94964 1423 aa14.92□□□□□ -0.02
ACSF3-209ENST00000537895 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
ACSF3-209ENST00000537895 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
ACSF3-209ENST00000537895 CHD1O14646 1710 aa14.89□□□□□ -0.03
ACSF3-209ENST00000537895 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
ACSF3-209ENST00000537895 FGD5Q6ZNL6 1462 aa14.86□□□□□ -0.03
ACSF3-209ENST00000537895 CUX1P39880 1505 aa14.8□□□□□ -0.04
ACSF3-209ENST00000537895 GRIN2BQ13224 1484 aa14.79□□□□□ -0.04
ACSF3-209ENST00000537895 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
ACSF3-209ENST00000537895 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
ACSF3-209ENST00000537895 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
ACSF3-209ENST00000537895 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
ACSF3-209ENST00000537895 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
ACSF3-209ENST00000537895 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
ACSF3-209ENST00000537895 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
ACSF3-209ENST00000537895 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
ACSF3-209ENST00000537895 ABCA10Q8WWZ4 1543 aa14.65□□□□□ -0.06
ACSF3-209ENST00000537895 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
ACSF3-209ENST00000537895 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
ACSF3-209ENST00000537895 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
ACSF3-209ENST00000537895 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
ACSF3-209ENST00000537895 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
ACSF3-209ENST00000537895 NUP160Q12769 1436 aa14.54□□□□□ -0.08
ACSF3-209ENST00000537895 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
ACSF3-209ENST00000537895 ADAMTS12P58397 1594 aa14.52□□□□□ -0.08
ACSF3-209ENST00000537895 CEP170Q5SW79 1584 aa14.52□□□□□ -0.08
ACSF3-209ENST00000537895 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
ACSF3-209ENST00000537895 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
ACSF3-209ENST00000537895 JPH4Q96JJ6 628 aa14.46□□□□□ -0.09
ACSF3-209ENST00000537895 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
ACSF3-209ENST00000537895 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
ACSF3-209ENST00000537895 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
ACSF3-209ENST00000537895 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms