RNA–Protein interactions for RNA: ENST00000537492.5

LINC01965-202, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-202ENST00000537492 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
LINC01965-202ENST00000537492 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
LINC01965-202ENST00000537492 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
LINC01965-202ENST00000537492 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
LINC01965-202ENST00000537492 ABCC9O60706 1549 aa19.81■□□□□ 0.76
LINC01965-202ENST00000537492 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
LINC01965-202ENST00000537492 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
LINC01965-202ENST00000537492 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
LINC01965-202ENST00000537492 NACADO15069 1562 aa18.79■□□□□ 0.6
LINC01965-202ENST00000537492 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
LINC01965-202ENST00000537492 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
LINC01965-202ENST00000537492 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
LINC01965-202ENST00000537492 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
LINC01965-202ENST00000537492 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
LINC01965-202ENST00000537492 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
LINC01965-202ENST00000537492 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
LINC01965-202ENST00000537492 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC01965-202ENST00000537492 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
LINC01965-202ENST00000537492 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.49
LINC01965-202ENST00000537492 FOXD1Q16676 465 aa18.08■□□□□ 0.48
LINC01965-202ENST00000537492 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
LINC01965-202ENST00000537492 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
LINC01965-202ENST00000537492 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
LINC01965-202ENST00000537492 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
LINC01965-202ENST00000537492 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
LINC01965-202ENST00000537492 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
LINC01965-202ENST00000537492 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
LINC01965-202ENST00000537492 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
LINC01965-202ENST00000537492 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
LINC01965-202ENST00000537492 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
LINC01965-202ENST00000537492 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
LINC01965-202ENST00000537492 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
LINC01965-202ENST00000537492 NESP48681 1621 aa17.12■□□□□ 0.33
LINC01965-202ENST00000537492 WIZO95785 1651 aa17.06■□□□□ 0.32
LINC01965-202ENST00000537492 ERCC6Q03468 1493 aa17■□□□□ 0.31
LINC01965-202ENST00000537492 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
LINC01965-202ENST00000537492 CUX2O14529 1486 aa16.96■□□□□ 0.31
LINC01965-202ENST00000537492 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
LINC01965-202ENST00000537492 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
LINC01965-202ENST00000537492 MSH5O43196 834 aa16.94■□□□□ 0.3
LINC01965-202ENST00000537492 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
LINC01965-202ENST00000537492 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
LINC01965-202ENST00000537492 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
LINC01965-202ENST00000537492 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
LINC01965-202ENST00000537492 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
LINC01965-202ENST00000537492 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
LINC01965-202ENST00000537492 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
LINC01965-202ENST00000537492 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
LINC01965-202ENST00000537492 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
LINC01965-202ENST00000537492 WDR62O43379 1518 aa16.7■□□□□ 0.26
LINC01965-202ENST00000537492 CFTRP13569 1480 aa16.69■□□□□ 0.26
LINC01965-202ENST00000537492 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
LINC01965-202ENST00000537492 ADRA2BP18089 450 aa16.69■□□□□ 0.26
LINC01965-202ENST00000537492 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
LINC01965-202ENST00000537492 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
LINC01965-202ENST00000537492 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
LINC01965-202ENST00000537492 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
LINC01965-202ENST00000537492 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
LINC01965-202ENST00000537492 TOPBP1Q92547 1522 aa16.38■□□□□ 0.21
LINC01965-202ENST00000537492 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
LINC01965-202ENST00000537492 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
LINC01965-202ENST00000537492 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
LINC01965-202ENST00000537492 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
LINC01965-202ENST00000537492 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
LINC01965-202ENST00000537492 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
LINC01965-202ENST00000537492 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
LINC01965-202ENST00000537492 CUX1P39880 1505 aa16.19■□□□□ 0.18
LINC01965-202ENST00000537492 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
LINC01965-202ENST00000537492 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC01965-202ENST00000537492 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
LINC01965-202ENST00000537492 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
LINC01965-202ENST00000537492 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
LINC01965-202ENST00000537492 CHD1O14646 1710 aa16.11■□□□□ 0.17
LINC01965-202ENST00000537492 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
LINC01965-202ENST00000537492 SOGA1O94964 1423 aa16.07■□□□□ 0.16
LINC01965-202ENST00000537492 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
LINC01965-202ENST00000537492 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
LINC01965-202ENST00000537492 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
LINC01965-202ENST00000537492 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
LINC01965-202ENST00000537492 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
LINC01965-202ENST00000537492 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
LINC01965-202ENST00000537492 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
LINC01965-202ENST00000537492 SYNJ1O43426 1573 aa16■□□□□ 0.15
LINC01965-202ENST00000537492 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
LINC01965-202ENST00000537492 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
LINC01965-202ENST00000537492 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
LINC01965-202ENST00000537492 ABCA10Q8WWZ4 1543 aa15.95■□□□□ 0.14
LINC01965-202ENST00000537492 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
LINC01965-202ENST00000537492 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
LINC01965-202ENST00000537492 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
LINC01965-202ENST00000537492 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
LINC01965-202ENST00000537492 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
LINC01965-202ENST00000537492 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
LINC01965-202ENST00000537492 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
LINC01965-202ENST00000537492 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
LINC01965-202ENST00000537492 FBLN2P98095 1184 aa15.87■□□□□ 0.13
LINC01965-202ENST00000537492 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
LINC01965-202ENST00000537492 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
LINC01965-202ENST00000537492 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
LINC01965-202ENST00000537492 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms