RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
RFX4-205ENST00000536722 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
RFX4-205ENST00000536722 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
RFX4-205ENST00000536722 ABCC9O60706 1549 aa24.41■■□□□ 1.5
RFX4-205ENST00000536722 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
RFX4-205ENST00000536722 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
RFX4-205ENST00000536722 NACADO15069 1562 aa23.42■■□□□ 1.34
RFX4-205ENST00000536722 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
RFX4-205ENST00000536722 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
RFX4-205ENST00000536722 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
RFX4-205ENST00000536722 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
RFX4-205ENST00000536722 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
RFX4-205ENST00000536722 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
RFX4-205ENST00000536722 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
RFX4-205ENST00000536722 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
RFX4-205ENST00000536722 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
RFX4-205ENST00000536722 SHROOM4Q9ULL8 1493 aa22.49■■□□□ 1.19
RFX4-205ENST00000536722 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
RFX4-205ENST00000536722 CC2D2AQ9P2K1 1620 aa22.12■■□□□ 1.13
RFX4-205ENST00000536722 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
RFX4-205ENST00000536722 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
RFX4-205ENST00000536722 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
RFX4-205ENST00000536722 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
RFX4-205ENST00000536722 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
RFX4-205ENST00000536722 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
RFX4-205ENST00000536722 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
RFX4-205ENST00000536722 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
RFX4-205ENST00000536722 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
RFX4-205ENST00000536722 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
RFX4-205ENST00000536722 WIZO95785 1651 aa21.4■■□□□ 1.02
RFX4-205ENST00000536722 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
RFX4-205ENST00000536722 NESP48681 1621 aa21.17■□□□□ 0.98
RFX4-205ENST00000536722 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
RFX4-205ENST00000536722 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
RFX4-205ENST00000536722 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
RFX4-205ENST00000536722 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
RFX4-205ENST00000536722 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
RFX4-205ENST00000536722 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
RFX4-205ENST00000536722 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
RFX4-205ENST00000536722 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
RFX4-205ENST00000536722 CFTRP13569 1480 aa20.87■□□□□ 0.93
RFX4-205ENST00000536722 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
RFX4-205ENST00000536722 CUX2O14529 1486 aa20.81■□□□□ 0.92
RFX4-205ENST00000536722 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
RFX4-205ENST00000536722 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
RFX4-205ENST00000536722 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
RFX4-205ENST00000536722 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
RFX4-205ENST00000536722 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
RFX4-205ENST00000536722 WDR62O43379 1518 aa20.67■□□□□ 0.9
RFX4-205ENST00000536722 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
RFX4-205ENST00000536722 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.89
RFX4-205ENST00000536722 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
RFX4-205ENST00000536722 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
RFX4-205ENST00000536722 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
RFX4-205ENST00000536722 CUX1P39880 1505 aa20.29■□□□□ 0.84
RFX4-205ENST00000536722 IFT140Q96RY7 1462 aa20.26■□□□□ 0.83
RFX4-205ENST00000536722 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
RFX4-205ENST00000536722 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
RFX4-205ENST00000536722 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
RFX4-205ENST00000536722 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
RFX4-205ENST00000536722 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
RFX4-205ENST00000536722 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
RFX4-205ENST00000536722 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
RFX4-205ENST00000536722 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
RFX4-205ENST00000536722 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
RFX4-205ENST00000536722 SOGA1O94964 1423 aa20.1■□□□□ 0.81
RFX4-205ENST00000536722 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
RFX4-205ENST00000536722 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.81
RFX4-205ENST00000536722 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
RFX4-205ENST00000536722 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
RFX4-205ENST00000536722 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
RFX4-205ENST00000536722 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
RFX4-205ENST00000536722 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
RFX4-205ENST00000536722 CHD1O14646 1710 aa19.95■□□□□ 0.78
RFX4-205ENST00000536722 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
RFX4-205ENST00000536722 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
RFX4-205ENST00000536722 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
RFX4-205ENST00000536722 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
RFX4-205ENST00000536722 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
RFX4-205ENST00000536722 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
RFX4-205ENST00000536722 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
RFX4-205ENST00000536722 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
RFX4-205ENST00000536722 FBLN2P98095 1184 aa19.74■□□□□ 0.75
RFX4-205ENST00000536722 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
RFX4-205ENST00000536722 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
RFX4-205ENST00000536722 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
RFX4-205ENST00000536722 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
RFX4-205ENST00000536722 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
RFX4-205ENST00000536722 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
RFX4-205ENST00000536722 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
RFX4-205ENST00000536722 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
RFX4-205ENST00000536722 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
RFX4-205ENST00000536722 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
RFX4-205ENST00000536722 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
RFX4-205ENST00000536722 NUP160Q12769 1436 aa19.6■□□□□ 0.73
RFX4-205ENST00000536722 IGF1RP08069 1367 aa19.59■□□□□ 0.73
RFX4-205ENST00000536722 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
RFX4-205ENST00000536722 CUL7Q14999 1698 aa19.56■□□□□ 0.72
RFX4-205ENST00000536722 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
RFX4-205ENST00000536722 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms