RNA–Protein interactions for RNA: ENST00000536481.1

ARHGEF17-203, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 2

Gene ARHGEF17, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-203ENST00000536481 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
ARHGEF17-203ENST00000536481 ABCC9O60706 1549 aa31.15■■■□□ 2.58
ARHGEF17-203ENST00000536481 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
ARHGEF17-203ENST00000536481 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
ARHGEF17-203ENST00000536481 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
ARHGEF17-203ENST00000536481 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
ARHGEF17-203ENST00000536481 NACADO15069 1562 aa28.8■■■□□ 2.2
ARHGEF17-203ENST00000536481 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
ARHGEF17-203ENST00000536481 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
ARHGEF17-203ENST00000536481 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
ARHGEF17-203ENST00000536481 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
ARHGEF17-203ENST00000536481 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
ARHGEF17-203ENST00000536481 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
ARHGEF17-203ENST00000536481 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
ARHGEF17-203ENST00000536481 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
ARHGEF17-203ENST00000536481 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
ARHGEF17-203ENST00000536481 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
ARHGEF17-203ENST00000536481 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
ARHGEF17-203ENST00000536481 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
ARHGEF17-203ENST00000536481 CUX2O14529 1486 aa27.19■■□□□ 1.94
ARHGEF17-203ENST00000536481 ERCC6Q03468 1493 aa26.95■■□□□ 1.91
ARHGEF17-203ENST00000536481 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
ARHGEF17-203ENST00000536481 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
ARHGEF17-203ENST00000536481 NESP48681 1621 aa26.5■■□□□ 1.83
ARHGEF17-203ENST00000536481 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
ARHGEF17-203ENST00000536481 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
ARHGEF17-203ENST00000536481 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
ARHGEF17-203ENST00000536481 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
ARHGEF17-203ENST00000536481 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
ARHGEF17-203ENST00000536481 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
ARHGEF17-203ENST00000536481 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
ARHGEF17-203ENST00000536481 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
ARHGEF17-203ENST00000536481 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
ARHGEF17-203ENST00000536481 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
ARHGEF17-203ENST00000536481 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
ARHGEF17-203ENST00000536481 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
ARHGEF17-203ENST00000536481 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
ARHGEF17-203ENST00000536481 WDR62O43379 1518 aa25.82■■□□□ 1.72
ARHGEF17-203ENST00000536481 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
ARHGEF17-203ENST00000536481 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.69
ARHGEF17-203ENST00000536481 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
ARHGEF17-203ENST00000536481 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
ARHGEF17-203ENST00000536481 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
ARHGEF17-203ENST00000536481 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
ARHGEF17-203ENST00000536481 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
ARHGEF17-203ENST00000536481 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
ARHGEF17-203ENST00000536481 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
ARHGEF17-203ENST00000536481 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
ARHGEF17-203ENST00000536481 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
ARHGEF17-203ENST00000536481 CFTRP13569 1480 aa25.29■■□□□ 1.64
ARHGEF17-203ENST00000536481 WIZO95785 1651 aa25.27■■□□□ 1.64
ARHGEF17-203ENST00000536481 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
ARHGEF17-203ENST00000536481 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
ARHGEF17-203ENST00000536481 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
ARHGEF17-203ENST00000536481 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
ARHGEF17-203ENST00000536481 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
ARHGEF17-203ENST00000536481 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
ARHGEF17-203ENST00000536481 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
ARHGEF17-203ENST00000536481 CHD1O14646 1710 aa24.9■■□□□ 1.58
ARHGEF17-203ENST00000536481 FBLN2P98095 1184 aa24.9■■□□□ 1.58
ARHGEF17-203ENST00000536481 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
ARHGEF17-203ENST00000536481 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
ARHGEF17-203ENST00000536481 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
ARHGEF17-203ENST00000536481 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
ARHGEF17-203ENST00000536481 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
ARHGEF17-203ENST00000536481 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
ARHGEF17-203ENST00000536481 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
ARHGEF17-203ENST00000536481 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
ARHGEF17-203ENST00000536481 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
ARHGEF17-203ENST00000536481 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF17-203ENST00000536481 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
ARHGEF17-203ENST00000536481 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
ARHGEF17-203ENST00000536481 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
ARHGEF17-203ENST00000536481 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
ARHGEF17-203ENST00000536481 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
ARHGEF17-203ENST00000536481 SOGA1O94964 1423 aa24.49■■□□□ 1.51
ARHGEF17-203ENST00000536481 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
ARHGEF17-203ENST00000536481 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
ARHGEF17-203ENST00000536481 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
ARHGEF17-203ENST00000536481 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
ARHGEF17-203ENST00000536481 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
ARHGEF17-203ENST00000536481 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
ARHGEF17-203ENST00000536481 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF17-203ENST00000536481 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
ARHGEF17-203ENST00000536481 CUX1P39880 1505 aa24.14■■□□□ 1.45
ARHGEF17-203ENST00000536481 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
ARHGEF17-203ENST00000536481 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
ARHGEF17-203ENST00000536481 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
ARHGEF17-203ENST00000536481 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
ARHGEF17-203ENST00000536481 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
ARHGEF17-203ENST00000536481 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
ARHGEF17-203ENST00000536481 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
ARHGEF17-203ENST00000536481 NUP160Q12769 1436 aa23.99■■□□□ 1.43
ARHGEF17-203ENST00000536481 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
ARHGEF17-203ENST00000536481 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
ARHGEF17-203ENST00000536481 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
ARHGEF17-203ENST00000536481 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
ARHGEF17-203ENST00000536481 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
ARHGEF17-203ENST00000536481 PRG4Q92954 1404 aaPredicted RBP23.85■■□□□ 1.41
ARHGEF17-203ENST00000536481 KDM6BO15054 1643 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms