RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
DDB1-207ENST00000535967 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
DDB1-207ENST00000535967 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
DDB1-207ENST00000535967 ABCC9O60706 1549 aa27.84■■■□□ 2.05
DDB1-207ENST00000535967 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
DDB1-207ENST00000535967 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
DDB1-207ENST00000535967 SENP3Q9H4L4 574 aaPredicted RBP26.48■■□□□ 1.83
DDB1-207ENST00000535967 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
DDB1-207ENST00000535967 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
DDB1-207ENST00000535967 NACADO15069 1562 aa26.08■■□□□ 1.76
DDB1-207ENST00000535967 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
DDB1-207ENST00000535967 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
DDB1-207ENST00000535967 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
DDB1-207ENST00000535967 BICRAQ9NZM4 1560 aa25.67■■□□□ 1.7
DDB1-207ENST00000535967 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
DDB1-207ENST00000535967 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
DDB1-207ENST00000535967 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
DDB1-207ENST00000535967 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
DDB1-207ENST00000535967 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.62
DDB1-207ENST00000535967 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
DDB1-207ENST00000535967 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
DDB1-207ENST00000535967 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
DDB1-207ENST00000535967 PLPPR3Q6T4P5 718 aa24.81■■□□□ 1.56
DDB1-207ENST00000535967 FOXD1Q16676 465 aa24.66■■□□□ 1.54
DDB1-207ENST00000535967 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
DDB1-207ENST00000535967 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
DDB1-207ENST00000535967 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
DDB1-207ENST00000535967 CUX2O14529 1486 aa24.01■■□□□ 1.43
DDB1-207ENST00000535967 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
DDB1-207ENST00000535967 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
DDB1-207ENST00000535967 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
DDB1-207ENST00000535967 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
DDB1-207ENST00000535967 NESP48681 1621 aa23.88■■□□□ 1.41
DDB1-207ENST00000535967 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
DDB1-207ENST00000535967 ADRA2BP18089 450 aa23.78■■□□□ 1.4
DDB1-207ENST00000535967 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
DDB1-207ENST00000535967 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
DDB1-207ENST00000535967 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
DDB1-207ENST00000535967 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
DDB1-207ENST00000535967 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
DDB1-207ENST00000535967 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.36
DDB1-207ENST00000535967 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
DDB1-207ENST00000535967 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
DDB1-207ENST00000535967 WIZO95785 1651 aa23.34■■□□□ 1.33
DDB1-207ENST00000535967 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
DDB1-207ENST00000535967 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
DDB1-207ENST00000535967 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
DDB1-207ENST00000535967 PIAS4Q8N2W9 510 aaPredicted RBP23.25■■□□□ 1.31
DDB1-207ENST00000535967 WDR62O43379 1518 aa23.25■■□□□ 1.31
DDB1-207ENST00000535967 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
DDB1-207ENST00000535967 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
DDB1-207ENST00000535967 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
DDB1-207ENST00000535967 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
DDB1-207ENST00000535967 CFTRP13569 1480 aa23.05■■□□□ 1.28
DDB1-207ENST00000535967 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
DDB1-207ENST00000535967 MSH5O43196 834 aa22.85■■□□□ 1.25
DDB1-207ENST00000535967 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
DDB1-207ENST00000535967 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
DDB1-207ENST00000535967 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
DDB1-207ENST00000535967 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
DDB1-207ENST00000535967 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
DDB1-207ENST00000535967 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
DDB1-207ENST00000535967 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
DDB1-207ENST00000535967 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
DDB1-207ENST00000535967 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
DDB1-207ENST00000535967 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
DDB1-207ENST00000535967 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.21
DDB1-207ENST00000535967 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
DDB1-207ENST00000535967 DNMBPQ6XZF7 1577 aa22.53■■□□□ 1.2
DDB1-207ENST00000535967 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
DDB1-207ENST00000535967 CHD1O14646 1710 aa22.49■■□□□ 1.19
DDB1-207ENST00000535967 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
DDB1-207ENST00000535967 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.191e-8■■■■□ 26.3
DDB1-207ENST00000535967 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
DDB1-207ENST00000535967 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
DDB1-207ENST00000535967 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
DDB1-207ENST00000535967 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
DDB1-207ENST00000535967 FBLN2P98095 1184 aa22.32■■□□□ 1.16
DDB1-207ENST00000535967 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
DDB1-207ENST00000535967 SOGA1O94964 1423 aa22.26■■□□□ 1.15
DDB1-207ENST00000535967 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
DDB1-207ENST00000535967 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
DDB1-207ENST00000535967 CUX1P39880 1505 aa22.21■■□□□ 1.15
DDB1-207ENST00000535967 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
DDB1-207ENST00000535967 TRHP20396 242 aaPredicted RBP22.18■■□□□ 1.14
DDB1-207ENST00000535967 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
DDB1-207ENST00000535967 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
DDB1-207ENST00000535967 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
DDB1-207ENST00000535967 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
DDB1-207ENST00000535967 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
DDB1-207ENST00000535967 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
DDB1-207ENST00000535967 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
DDB1-207ENST00000535967 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
DDB1-207ENST00000535967 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
DDB1-207ENST00000535967 TOP2BQ02880 1626 aa22■■□□□ 1.11
DDB1-207ENST00000535967 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
DDB1-207ENST00000535967 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
DDB1-207ENST00000535967 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
DDB1-207ENST00000535967 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
DDB1-207ENST00000535967 PPP4R3CPQ6ZMV5 832 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms