RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 NISCHQ9Y2I1 1504 aa25.89■■□□□ 1.74
UBE3B-205ENST00000535900 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
UBE3B-205ENST00000535900 ABCC9O60706 1549 aa23.2■■□□□ 1.3
UBE3B-205ENST00000535900 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
UBE3B-205ENST00000535900 NACADO15069 1562 aa21.97■■□□□ 1.11
UBE3B-205ENST00000535900 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
UBE3B-205ENST00000535900 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
UBE3B-205ENST00000535900 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
UBE3B-205ENST00000535900 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
UBE3B-205ENST00000535900 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBE3B-205ENST00000535900 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
UBE3B-205ENST00000535900 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
UBE3B-205ENST00000535900 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
UBE3B-205ENST00000535900 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
UBE3B-205ENST00000535900 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
UBE3B-205ENST00000535900 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
UBE3B-205ENST00000535900 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
UBE3B-205ENST00000535900 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
UBE3B-205ENST00000535900 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
UBE3B-205ENST00000535900 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
UBE3B-205ENST00000535900 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
UBE3B-205ENST00000535900 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
UBE3B-205ENST00000535900 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
UBE3B-205ENST00000535900 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
UBE3B-205ENST00000535900 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
UBE3B-205ENST00000535900 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
UBE3B-205ENST00000535900 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
UBE3B-205ENST00000535900 CUX2O14529 1486 aa19.99■□□□□ 0.79
UBE3B-205ENST00000535900 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
UBE3B-205ENST00000535900 NESP48681 1621 aa19.92■□□□□ 0.78
UBE3B-205ENST00000535900 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
UBE3B-205ENST00000535900 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
UBE3B-205ENST00000535900 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
UBE3B-205ENST00000535900 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
UBE3B-205ENST00000535900 WIZO95785 1651 aa19.75■□□□□ 0.75
UBE3B-205ENST00000535900 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
UBE3B-205ENST00000535900 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
UBE3B-205ENST00000535900 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
UBE3B-205ENST00000535900 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
UBE3B-205ENST00000535900 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
UBE3B-205ENST00000535900 WDR62O43379 1518 aa19.51■□□□□ 0.71
UBE3B-205ENST00000535900 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
UBE3B-205ENST00000535900 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
UBE3B-205ENST00000535900 CFTRP13569 1480 aa19.41■□□□□ 0.7
UBE3B-205ENST00000535900 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
UBE3B-205ENST00000535900 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
UBE3B-205ENST00000535900 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
UBE3B-205ENST00000535900 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
UBE3B-205ENST00000535900 TOPBP1Q92547 1522 aa19.08■□□□□ 0.64
UBE3B-205ENST00000535900 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
UBE3B-205ENST00000535900 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
UBE3B-205ENST00000535900 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
UBE3B-205ENST00000535900 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
UBE3B-205ENST00000535900 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
UBE3B-205ENST00000535900 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
UBE3B-205ENST00000535900 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
UBE3B-205ENST00000535900 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
UBE3B-205ENST00000535900 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
UBE3B-205ENST00000535900 CHD1O14646 1710 aa18.86■□□□□ 0.61
UBE3B-205ENST00000535900 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
UBE3B-205ENST00000535900 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
UBE3B-205ENST00000535900 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
UBE3B-205ENST00000535900 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.65e-6■■□□□ 14.3
UBE3B-205ENST00000535900 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
UBE3B-205ENST00000535900 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
UBE3B-205ENST00000535900 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
UBE3B-205ENST00000535900 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
UBE3B-205ENST00000535900 CUX1P39880 1505 aa18.76■□□□□ 0.59
UBE3B-205ENST00000535900 SOGA1O94964 1423 aa18.75■□□□□ 0.59
UBE3B-205ENST00000535900 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
UBE3B-205ENST00000535900 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
UBE3B-205ENST00000535900 FBLN2P98095 1184 aa18.69■□□□□ 0.58
UBE3B-205ENST00000535900 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
UBE3B-205ENST00000535900 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
UBE3B-205ENST00000535900 GRIN2BQ13224 1484 aa18.64■□□□□ 0.57
UBE3B-205ENST00000535900 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
UBE3B-205ENST00000535900 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
UBE3B-205ENST00000535900 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
UBE3B-205ENST00000535900 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.56
UBE3B-205ENST00000535900 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
UBE3B-205ENST00000535900 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
UBE3B-205ENST00000535900 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
UBE3B-205ENST00000535900 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
UBE3B-205ENST00000535900 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-205ENST00000535900 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
UBE3B-205ENST00000535900 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
UBE3B-205ENST00000535900 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
UBE3B-205ENST00000535900 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
UBE3B-205ENST00000535900 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
UBE3B-205ENST00000535900 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-205ENST00000535900 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
UBE3B-205ENST00000535900 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
UBE3B-205ENST00000535900 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
UBE3B-205ENST00000535900 NUP160Q12769 1436 aa18.32■□□□□ 0.52
UBE3B-205ENST00000535900 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
UBE3B-205ENST00000535900 SHROOM2Q13796 1616 aa18.27■□□□□ 0.51
UBE3B-205ENST00000535900 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
UBE3B-205ENST00000535900 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
UBE3B-205ENST00000535900 CUL7Q14999 1698 aa18.15■□□□□ 0.5
UBE3B-205ENST00000535900 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms