RNA–Protein interactions for RNA: ENST00000535538.1

ERV3-1-203, Transcript of endogenous retrovirus group 3 member 1, envelope, humanhuman

TSL 3

Gene ERV3-1, Length 358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERV3-1-203ENST00000535538 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
ERV3-1-203ENST00000535538 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
ERV3-1-203ENST00000535538 ABCC9O60706 1549 aa18.79■□□□□ 0.6
ERV3-1-203ENST00000535538 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
ERV3-1-203ENST00000535538 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
ERV3-1-203ENST00000535538 NACADO15069 1562 aa17.9■□□□□ 0.46
ERV3-1-203ENST00000535538 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
ERV3-1-203ENST00000535538 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
ERV3-1-203ENST00000535538 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
ERV3-1-203ENST00000535538 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
ERV3-1-203ENST00000535538 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
ERV3-1-203ENST00000535538 BICRAQ9NZM4 1560 aa17.44■□□□□ 0.38
ERV3-1-203ENST00000535538 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
ERV3-1-203ENST00000535538 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
ERV3-1-203ENST00000535538 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
ERV3-1-203ENST00000535538 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
ERV3-1-203ENST00000535538 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
ERV3-1-203ENST00000535538 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
ERV3-1-203ENST00000535538 SMARCA4P51532 1647 aa16.57■□□□□ 0.24
ERV3-1-203ENST00000535538 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
ERV3-1-203ENST00000535538 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
ERV3-1-203ENST00000535538 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
ERV3-1-203ENST00000535538 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
ERV3-1-203ENST00000535538 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
ERV3-1-203ENST00000535538 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
ERV3-1-203ENST00000535538 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
ERV3-1-203ENST00000535538 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
ERV3-1-203ENST00000535538 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
ERV3-1-203ENST00000535538 WIZO95785 1651 aa16.3■□□□□ 0.2
ERV3-1-203ENST00000535538 NESP48681 1621 aa16.22■□□□□ 0.19
ERV3-1-203ENST00000535538 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
ERV3-1-203ENST00000535538 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
ERV3-1-203ENST00000535538 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
ERV3-1-203ENST00000535538 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
ERV3-1-203ENST00000535538 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
ERV3-1-203ENST00000535538 CUX2O14529 1486 aa16.03■□□□□ 0.16
ERV3-1-203ENST00000535538 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
ERV3-1-203ENST00000535538 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
ERV3-1-203ENST00000535538 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
ERV3-1-203ENST00000535538 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
ERV3-1-203ENST00000535538 CFTRP13569 1480 aa15.89■□□□□ 0.13
ERV3-1-203ENST00000535538 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
ERV3-1-203ENST00000535538 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
ERV3-1-203ENST00000535538 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
ERV3-1-203ENST00000535538 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
ERV3-1-203ENST00000535538 WDR62O43379 1518 aa15.79■□□□□ 0.12
ERV3-1-203ENST00000535538 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
ERV3-1-203ENST00000535538 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
ERV3-1-203ENST00000535538 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
ERV3-1-203ENST00000535538 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
ERV3-1-203ENST00000535538 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
ERV3-1-203ENST00000535538 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
ERV3-1-203ENST00000535538 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
ERV3-1-203ENST00000535538 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
ERV3-1-203ENST00000535538 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
ERV3-1-203ENST00000535538 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
ERV3-1-203ENST00000535538 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
ERV3-1-203ENST00000535538 CUX1P39880 1505 aa15.42■□□□□ 0.06
ERV3-1-203ENST00000535538 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
ERV3-1-203ENST00000535538 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
ERV3-1-203ENST00000535538 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
ERV3-1-203ENST00000535538 SOGA1O94964 1423 aa15.4■□□□□ 0.06
ERV3-1-203ENST00000535538 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.062e-11■■■□□ 18.6
ERV3-1-203ENST00000535538 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
ERV3-1-203ENST00000535538 TDRD9Q8NDG6 1382 aaKnown RBP15.35■□□□□ 0.05
ERV3-1-203ENST00000535538 CHD1O14646 1710 aa15.31■□□□□ 0.04
ERV3-1-203ENST00000535538 FBLN2P98095 1184 aa15.3■□□□□ 0.04
ERV3-1-203ENST00000535538 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
ERV3-1-203ENST00000535538 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
ERV3-1-203ENST00000535538 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
ERV3-1-203ENST00000535538 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
ERV3-1-203ENST00000535538 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
ERV3-1-203ENST00000535538 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
ERV3-1-203ENST00000535538 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
ERV3-1-203ENST00000535538 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
ERV3-1-203ENST00000535538 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
ERV3-1-203ENST00000535538 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
ERV3-1-203ENST00000535538 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
ERV3-1-203ENST00000535538 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
ERV3-1-203ENST00000535538 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
ERV3-1-203ENST00000535538 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
ERV3-1-203ENST00000535538 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
ERV3-1-203ENST00000535538 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
ERV3-1-203ENST00000535538 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
ERV3-1-203ENST00000535538 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
ERV3-1-203ENST00000535538 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
ERV3-1-203ENST00000535538 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
ERV3-1-203ENST00000535538 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
ERV3-1-203ENST00000535538 ADAMTS12P58397 1594 aa15.04■□□□□ -0
ERV3-1-203ENST00000535538 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
ERV3-1-203ENST00000535538 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
ERV3-1-203ENST00000535538 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
ERV3-1-203ENST00000535538 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
ERV3-1-203ENST00000535538 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
ERV3-1-203ENST00000535538 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
ERV3-1-203ENST00000535538 NUP160Q12769 1436 aa14.93□□□□□ -0.02
ERV3-1-203ENST00000535538 IGF1RP08069 1367 aa14.91□□□□□ -0.02
ERV3-1-203ENST00000535538 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
ERV3-1-203ENST00000535538 CUL7Q14999 1698 aa14.88□□□□□ -0.03
ERV3-1-203ENST00000535538 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms