RNA–Protein interactions for RNA: ENST00000535466.5

CD4-203, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-203ENST00000535466 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
CD4-203ENST00000535466 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
CD4-203ENST00000535466 ABCC9O60706 1549 aa13.99□□□□□ -0.17
CD4-203ENST00000535466 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
CD4-203ENST00000535466 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
CD4-203ENST00000535466 NACADO15069 1562 aa13.34□□□□□ -0.27
CD4-203ENST00000535466 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
CD4-203ENST00000535466 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
CD4-203ENST00000535466 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
CD4-203ENST00000535466 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
CD4-203ENST00000535466 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
CD4-203ENST00000535466 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
CD4-203ENST00000535466 SCRIBQ14160 1630 aa13□□□□□ -0.33
CD4-203ENST00000535466 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
CD4-203ENST00000535466 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
CD4-203ENST00000535466 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
CD4-203ENST00000535466 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
CD4-203ENST00000535466 CECR2Q9BXF3 1484 aa12.55□□□□□ -0.4
CD4-203ENST00000535466 CHIC1Q5VXU3 224 aa12.46□□□□□ -0.41
CD4-203ENST00000535466 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
CD4-203ENST00000535466 ATAD2BQ9ULI0 1458 aa12.37□□□□□ -0.43
CD4-203ENST00000535466 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
CD4-203ENST00000535466 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
CD4-203ENST00000535466 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
CD4-203ENST00000535466 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CD4-203ENST00000535466 HMGXB3Q12766 1538 aa12.29□□□□□ -0.44
CD4-203ENST00000535466 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
CD4-203ENST00000535466 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
CD4-203ENST00000535466 WIZO95785 1651 aa12.21□□□□□ -0.45
CD4-203ENST00000535466 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
CD4-203ENST00000535466 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
CD4-203ENST00000535466 NESP48681 1621 aa12.15□□□□□ -0.47
CD4-203ENST00000535466 TOP2AP11388 1531 aaKnown RBP12.05□□□□□ -0.48
CD4-203ENST00000535466 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
CD4-203ENST00000535466 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
CD4-203ENST00000535466 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
CD4-203ENST00000535466 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
CD4-203ENST00000535466 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CD4-203ENST00000535466 CUX2O14529 1486 aa11.91□□□□□ -0.5
CD4-203ENST00000535466 CFTRP13569 1480 aa11.91□□□□□ -0.5
CD4-203ENST00000535466 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
CD4-203ENST00000535466 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
CD4-203ENST00000535466 WDR62O43379 1518 aa11.84□□□□□ -0.51
CD4-203ENST00000535466 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CD4-203ENST00000535466 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
CD4-203ENST00000535466 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
CD4-203ENST00000535466 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
CD4-203ENST00000535466 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
CD4-203ENST00000535466 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
CD4-203ENST00000535466 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
CD4-203ENST00000535466 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
CD4-203ENST00000535466 ZNF608Q9ULD9 1512 aaPredicted RBP11.61□□□□□ -0.55
CD4-203ENST00000535466 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
CD4-203ENST00000535466 CUX1P39880 1505 aa11.6□□□□□ -0.55
CD4-203ENST00000535466 TARBP1Q13395 1621 aaKnown RBP11.58□□□□□ -0.56
CD4-203ENST00000535466 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
CD4-203ENST00000535466 IFT140Q96RY7 1462 aa11.56□□□□□ -0.56
CD4-203ENST00000535466 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
CD4-203ENST00000535466 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
CD4-203ENST00000535466 FGD5Q6ZNL6 1462 aa11.52□□□□□ -0.56
CD4-203ENST00000535466 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
CD4-203ENST00000535466 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
CD4-203ENST00000535466 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.57
CD4-203ENST00000535466 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
CD4-203ENST00000535466 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
CD4-203ENST00000535466 SOGA1O94964 1423 aa11.43□□□□□ -0.58
CD4-203ENST00000535466 TOP2BQ02880 1626 aa11.43□□□□□ -0.58
CD4-203ENST00000535466 TDRD9Q8NDG6 1382 aaKnown RBP11.42□□□□□ -0.58
CD4-203ENST00000535466 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
CD4-203ENST00000535466 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
CD4-203ENST00000535466 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
CD4-203ENST00000535466 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
CD4-203ENST00000535466 CHD1O14646 1710 aa11.38□□□□□ -0.59
CD4-203ENST00000535466 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
CD4-203ENST00000535466 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
CD4-203ENST00000535466 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
CD4-203ENST00000535466 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
CD4-203ENST00000535466 CLASP1Q7Z460 1538 aa11.31□□□□□ -0.6
CD4-203ENST00000535466 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
CD4-203ENST00000535466 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
CD4-203ENST00000535466 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
CD4-203ENST00000535466 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
CD4-203ENST00000535466 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
CD4-203ENST00000535466 SYNJ2O15056 1496 aa11.28□□□□□ -0.6
CD4-203ENST00000535466 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
CD4-203ENST00000535466 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
CD4-203ENST00000535466 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
CD4-203ENST00000535466 GRIN2AQ12879 1464 aa11.22□□□□□ -0.61
CD4-203ENST00000535466 ARAP1Q96P48 1450 aa11.22□□□□□ -0.61
CD4-203ENST00000535466 NUP160Q12769 1436 aa11.21□□□□□ -0.61
CD4-203ENST00000535466 FBLN2P98095 1184 aa11.2□□□□□ -0.62
CD4-203ENST00000535466 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
CD4-203ENST00000535466 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
CD4-203ENST00000535466 RUSC2Q8N2Y8 1516 aa11.17□□□□□ -0.62
CD4-203ENST00000535466 IGF1RP08069 1367 aa11.16□□□□□ -0.62
CD4-203ENST00000535466 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
CD4-203ENST00000535466 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
CD4-203ENST00000535466 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
CD4-203ENST00000535466 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
CD4-203ENST00000535466 CUL7Q14999 1698 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms