RNA–Protein interactions for RNA: ENST00000535299.5

NTF3-203, Transcript of neurotrophin 3, humanhuman

TSL 5

Gene NTF3, Length 875 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-203ENST00000535299 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
NTF3-203ENST00000535299 ABCC9O60706 1549 aa33.29■■■□□ 2.92
NTF3-203ENST00000535299 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
NTF3-203ENST00000535299 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
NTF3-203ENST00000535299 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
NTF3-203ENST00000535299 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
NTF3-203ENST00000535299 NACADO15069 1562 aa31.28■■■□□ 2.6
NTF3-203ENST00000535299 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
NTF3-203ENST00000535299 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
NTF3-203ENST00000535299 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
NTF3-203ENST00000535299 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
NTF3-203ENST00000535299 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
NTF3-203ENST00000535299 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
NTF3-203ENST00000535299 SHROOM4Q9ULL8 1493 aa30.22■■■□□ 2.43
NTF3-203ENST00000535299 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
NTF3-203ENST00000535299 SCRIBQ14160 1630 aa29.99■■■□□ 2.39
NTF3-203ENST00000535299 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
NTF3-203ENST00000535299 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
NTF3-203ENST00000535299 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
NTF3-203ENST00000535299 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
NTF3-203ENST00000535299 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
NTF3-203ENST00000535299 CUX2O14529 1486 aa28.83■■■□□ 2.21
NTF3-203ENST00000535299 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
NTF3-203ENST00000535299 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
NTF3-203ENST00000535299 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
NTF3-203ENST00000535299 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
NTF3-203ENST00000535299 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
NTF3-203ENST00000535299 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
NTF3-203ENST00000535299 NESP48681 1621 aa28.46■■■□□ 2.15
NTF3-203ENST00000535299 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
NTF3-203ENST00000535299 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
NTF3-203ENST00000535299 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
NTF3-203ENST00000535299 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
NTF3-203ENST00000535299 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
NTF3-203ENST00000535299 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
NTF3-203ENST00000535299 KIF21AQ7Z4S6 1674 aa27.95■■■□□ 2.07
NTF3-203ENST00000535299 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
NTF3-203ENST00000535299 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
NTF3-203ENST00000535299 WIZO95785 1651 aa27.78■■■□□ 2.04
NTF3-203ENST00000535299 WDR62O43379 1518 aa27.77■■■□□ 2.04
NTF3-203ENST00000535299 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.04
NTF3-203ENST00000535299 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
NTF3-203ENST00000535299 CFTRP13569 1480 aa27.64■■■□□ 2.02
NTF3-203ENST00000535299 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
NTF3-203ENST00000535299 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
NTF3-203ENST00000535299 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
NTF3-203ENST00000535299 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
NTF3-203ENST00000535299 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
NTF3-203ENST00000535299 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
NTF3-203ENST00000535299 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
NTF3-203ENST00000535299 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
NTF3-203ENST00000535299 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
NTF3-203ENST00000535299 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
NTF3-203ENST00000535299 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.92
NTF3-203ENST00000535299 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.92
NTF3-203ENST00000535299 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.92
NTF3-203ENST00000535299 FBLN2P98095 1184 aa26.99■■□□□ 1.91
NTF3-203ENST00000535299 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
NTF3-203ENST00000535299 ARHGEF11O15085 1522 aa26.97■■□□□ 1.91
NTF3-203ENST00000535299 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
NTF3-203ENST00000535299 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
NTF3-203ENST00000535299 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
NTF3-203ENST00000535299 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
NTF3-203ENST00000535299 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
NTF3-203ENST00000535299 SOGA1O94964 1423 aa26.81■■□□□ 1.88
NTF3-203ENST00000535299 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
NTF3-203ENST00000535299 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
NTF3-203ENST00000535299 CHMP7Q8WUX9 453 aaPredicted RBP26.74■■□□□ 1.87
NTF3-203ENST00000535299 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
NTF3-203ENST00000535299 CHD1O14646 1710 aa26.68■■□□□ 1.86
NTF3-203ENST00000535299 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
NTF3-203ENST00000535299 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
NTF3-203ENST00000535299 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
NTF3-203ENST00000535299 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
NTF3-203ENST00000535299 GRIN2BQ13224 1484 aa26.56■■□□□ 1.84
NTF3-203ENST00000535299 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
NTF3-203ENST00000535299 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
NTF3-203ENST00000535299 CUX1P39880 1505 aa26.49■■□□□ 1.83
NTF3-203ENST00000535299 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
NTF3-203ENST00000535299 CLASP1Q7Z460 1538 aa26.45■■□□□ 1.83
NTF3-203ENST00000535299 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
NTF3-203ENST00000535299 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
NTF3-203ENST00000535299 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
NTF3-203ENST00000535299 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
NTF3-203ENST00000535299 WRNQ14191 1432 aaPredicted RBP eCLIP26.26■■□□□ 1.79
NTF3-203ENST00000535299 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
NTF3-203ENST00000535299 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
NTF3-203ENST00000535299 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NTF3-203ENST00000535299 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
NTF3-203ENST00000535299 NUP160Q12769 1436 aa26.09■■□□□ 1.77
NTF3-203ENST00000535299 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
NTF3-203ENST00000535299 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
NTF3-203ENST00000535299 TOP2BQ02880 1626 aa26■■□□□ 1.75
NTF3-203ENST00000535299 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
NTF3-203ENST00000535299 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
NTF3-203ENST00000535299 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
NTF3-203ENST00000535299 NPM1P06748 294 aaKnown RBP eCLIP25.94■■□□□ 1.74
NTF3-203ENST00000535299 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
NTF3-203ENST00000535299 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
NTF3-203ENST00000535299 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms