RNA–Protein interactions for RNA: ENST00000535112.1

LDHB-207, Transcript of lactate dehydrogenase B, humanhuman

TSL 5

Gene LDHB, Length 252 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-207ENST00000535112 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
LDHB-207ENST00000535112 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
LDHB-207ENST00000535112 ABCC9O60706 1549 aa21.8■■□□□ 1.08
LDHB-207ENST00000535112 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
LDHB-207ENST00000535112 NACADO15069 1562 aa20.94■□□□□ 0.94
LDHB-207ENST00000535112 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
LDHB-207ENST00000535112 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
LDHB-207ENST00000535112 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
LDHB-207ENST00000535112 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
LDHB-207ENST00000535112 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
LDHB-207ENST00000535112 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
LDHB-207ENST00000535112 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
LDHB-207ENST00000535112 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
LDHB-207ENST00000535112 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
LDHB-207ENST00000535112 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
LDHB-207ENST00000535112 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
LDHB-207ENST00000535112 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
LDHB-207ENST00000535112 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
LDHB-207ENST00000535112 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
LDHB-207ENST00000535112 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
LDHB-207ENST00000535112 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
LDHB-207ENST00000535112 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
LDHB-207ENST00000535112 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
LDHB-207ENST00000535112 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
LDHB-207ENST00000535112 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
LDHB-207ENST00000535112 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
LDHB-207ENST00000535112 WIZO95785 1651 aa19.18■□□□□ 0.66
LDHB-207ENST00000535112 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
LDHB-207ENST00000535112 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
LDHB-207ENST00000535112 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
LDHB-207ENST00000535112 NESP48681 1621 aa18.89■□□□□ 0.62
LDHB-207ENST00000535112 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
LDHB-207ENST00000535112 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
LDHB-207ENST00000535112 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
LDHB-207ENST00000535112 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
LDHB-207ENST00000535112 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
LDHB-207ENST00000535112 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
LDHB-207ENST00000535112 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
LDHB-207ENST00000535112 CFTRP13569 1480 aa18.61■□□□□ 0.57
LDHB-207ENST00000535112 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
LDHB-207ENST00000535112 CUX2O14529 1486 aa18.58■□□□□ 0.57
LDHB-207ENST00000535112 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
LDHB-207ENST00000535112 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
LDHB-207ENST00000535112 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
LDHB-207ENST00000535112 WDR62O43379 1518 aa18.49■□□□□ 0.55
LDHB-207ENST00000535112 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
LDHB-207ENST00000535112 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
LDHB-207ENST00000535112 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
LDHB-207ENST00000535112 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
LDHB-207ENST00000535112 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
LDHB-207ENST00000535112 CUX1P39880 1505 aa18.14■□□□□ 0.49
LDHB-207ENST00000535112 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
LDHB-207ENST00000535112 POLA1P09884 1462 aaPredicted RBP18.1■□□□□ 0.49
LDHB-207ENST00000535112 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
LDHB-207ENST00000535112 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
LDHB-207ENST00000535112 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
LDHB-207ENST00000535112 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
LDHB-207ENST00000535112 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
LDHB-207ENST00000535112 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
LDHB-207ENST00000535112 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
LDHB-207ENST00000535112 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
LDHB-207ENST00000535112 TOP2BQ02880 1626 aa18■□□□□ 0.47
LDHB-207ENST00000535112 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
LDHB-207ENST00000535112 SOGA1O94964 1423 aa17.94■□□□□ 0.46
LDHB-207ENST00000535112 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
LDHB-207ENST00000535112 CHD1O14646 1710 aa17.92■□□□□ 0.46
LDHB-207ENST00000535112 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.46
LDHB-207ENST00000535112 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
LDHB-207ENST00000535112 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
LDHB-207ENST00000535112 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
LDHB-207ENST00000535112 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
LDHB-207ENST00000535112 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
LDHB-207ENST00000535112 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
LDHB-207ENST00000535112 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
LDHB-207ENST00000535112 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
LDHB-207ENST00000535112 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
LDHB-207ENST00000535112 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
LDHB-207ENST00000535112 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
LDHB-207ENST00000535112 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
LDHB-207ENST00000535112 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
LDHB-207ENST00000535112 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
LDHB-207ENST00000535112 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
LDHB-207ENST00000535112 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
LDHB-207ENST00000535112 FBLN2P98095 1184 aa17.61■□□□□ 0.41
LDHB-207ENST00000535112 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
LDHB-207ENST00000535112 CUL7Q14999 1698 aa17.57■□□□□ 0.4
LDHB-207ENST00000535112 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
LDHB-207ENST00000535112 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
LDHB-207ENST00000535112 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
LDHB-207ENST00000535112 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
LDHB-207ENST00000535112 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
LDHB-207ENST00000535112 NUP160Q12769 1436 aa17.48■□□□□ 0.39
LDHB-207ENST00000535112 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
LDHB-207ENST00000535112 SHROOM2Q13796 1616 aa17.46■□□□□ 0.39
LDHB-207ENST00000535112 IGF1RP08069 1367 aa17.44■□□□□ 0.38
LDHB-207ENST00000535112 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
LDHB-207ENST00000535112 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
LDHB-207ENST00000535112 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
LDHB-207ENST00000535112 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
LDHB-207ENST00000535112 CTTNBP2Q8WZ74 1663 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms