RNA–Protein interactions for RNA: ENST00000534962.1

AP003717.2-201, humanhuman

BASIC

Gene AP003717.2, Length 898 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003717.2-201ENST00000534962 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
AP003717.2-201ENST00000534962 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
AP003717.2-201ENST00000534962 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
AP003717.2-201ENST00000534962 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
AP003717.2-201ENST00000534962 ABCC9O60706 1549 aa26.41■■□□□ 1.82
AP003717.2-201ENST00000534962 RB1CC1Q8TDY2 1594 aa25.24■■□□□ 1.63
AP003717.2-201ENST00000534962 NACADO15069 1562 aa25.14■■□□□ 1.62
AP003717.2-201ENST00000534962 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
AP003717.2-201ENST00000534962 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
AP003717.2-201ENST00000534962 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
AP003717.2-201ENST00000534962 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
AP003717.2-201ENST00000534962 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
AP003717.2-201ENST00000534962 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
AP003717.2-201ENST00000534962 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
AP003717.2-201ENST00000534962 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
AP003717.2-201ENST00000534962 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
AP003717.2-201ENST00000534962 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
AP003717.2-201ENST00000534962 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
AP003717.2-201ENST00000534962 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
AP003717.2-201ENST00000534962 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
AP003717.2-201ENST00000534962 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
AP003717.2-201ENST00000534962 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
AP003717.2-201ENST00000534962 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
AP003717.2-201ENST00000534962 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
AP003717.2-201ENST00000534962 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
AP003717.2-201ENST00000534962 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
AP003717.2-201ENST00000534962 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
AP003717.2-201ENST00000534962 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
AP003717.2-201ENST00000534962 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
AP003717.2-201ENST00000534962 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
AP003717.2-201ENST00000534962 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
AP003717.2-201ENST00000534962 FOXD1Q16676 465 aa22.88■■□□□ 1.25
AP003717.2-201ENST00000534962 NESP48681 1621 aa22.76■■□□□ 1.23
AP003717.2-201ENST00000534962 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
AP003717.2-201ENST00000534962 CUX2O14529 1486 aa22.75■■□□□ 1.23
AP003717.2-201ENST00000534962 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
AP003717.2-201ENST00000534962 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
AP003717.2-201ENST00000534962 WIZO95785 1651 aa22.62■■□□□ 1.21
AP003717.2-201ENST00000534962 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
AP003717.2-201ENST00000534962 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
AP003717.2-201ENST00000534962 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
AP003717.2-201ENST00000534962 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
AP003717.2-201ENST00000534962 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
AP003717.2-201ENST00000534962 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
AP003717.2-201ENST00000534962 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
AP003717.2-201ENST00000534962 CFTRP13569 1480 aa22.31■■□□□ 1.16
AP003717.2-201ENST00000534962 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
AP003717.2-201ENST00000534962 WDR62O43379 1518 aa22.26■■□□□ 1.15
AP003717.2-201ENST00000534962 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
AP003717.2-201ENST00000534962 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
AP003717.2-201ENST00000534962 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
AP003717.2-201ENST00000534962 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
AP003717.2-201ENST00000534962 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
AP003717.2-201ENST00000534962 TOPBP1Q92547 1522 aa21.84■■□□□ 1.09
AP003717.2-201ENST00000534962 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
AP003717.2-201ENST00000534962 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
AP003717.2-201ENST00000534962 ADRA2BP18089 450 aa21.77■■□□□ 1.08
AP003717.2-201ENST00000534962 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
AP003717.2-201ENST00000534962 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
AP003717.2-201ENST00000534962 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
AP003717.2-201ENST00000534962 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
AP003717.2-201ENST00000534962 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
AP003717.2-201ENST00000534962 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
AP003717.2-201ENST00000534962 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
AP003717.2-201ENST00000534962 PIAS4Q8N2W9 510 aaPredicted RBP21.57■■□□□ 1.04
AP003717.2-201ENST00000534962 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
AP003717.2-201ENST00000534962 CUX1P39880 1505 aa21.53■■□□□ 1.04
AP003717.2-201ENST00000534962 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.04
AP003717.2-201ENST00000534962 SOGA1O94964 1423 aa21.52■■□□□ 1.04
AP003717.2-201ENST00000534962 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
AP003717.2-201ENST00000534962 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
AP003717.2-201ENST00000534962 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
AP003717.2-201ENST00000534962 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
AP003717.2-201ENST00000534962 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
AP003717.2-201ENST00000534962 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
AP003717.2-201ENST00000534962 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
AP003717.2-201ENST00000534962 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
AP003717.2-201ENST00000534962 CHD1O14646 1710 aa21.39■■□□□ 1.01
AP003717.2-201ENST00000534962 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
AP003717.2-201ENST00000534962 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
AP003717.2-201ENST00000534962 GRIN2BQ13224 1484 aa21.32■■□□□ 1
AP003717.2-201ENST00000534962 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
AP003717.2-201ENST00000534962 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
AP003717.2-201ENST00000534962 MSH5O43196 834 aa21.29■■□□□ 1
AP003717.2-201ENST00000534962 FBLN2P98095 1184 aa21.28■■□□□ 1
AP003717.2-201ENST00000534962 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
AP003717.2-201ENST00000534962 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
AP003717.2-201ENST00000534962 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
AP003717.2-201ENST00000534962 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
AP003717.2-201ENST00000534962 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
AP003717.2-201ENST00000534962 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
AP003717.2-201ENST00000534962 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
AP003717.2-201ENST00000534962 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
AP003717.2-201ENST00000534962 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
AP003717.2-201ENST00000534962 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
AP003717.2-201ENST00000534962 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
AP003717.2-201ENST00000534962 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
AP003717.2-201ENST00000534962 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
AP003717.2-201ENST00000534962 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
AP003717.2-201ENST00000534962 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms