RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
NCAM1-218ENST00000534516 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
NCAM1-218ENST00000534516 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
NCAM1-218ENST00000534516 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
NCAM1-218ENST00000534516 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
NCAM1-218ENST00000534516 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
NCAM1-218ENST00000534516 ABCC9O60706 1549 aa18.86■□□□□ 0.61
NCAM1-218ENST00000534516 FOXD1Q16676 465 aa18.47■□□□□ 0.55
NCAM1-218ENST00000534516 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
NCAM1-218ENST00000534516 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
NCAM1-218ENST00000534516 NACADO15069 1562 aa17.96■□□□□ 0.46
NCAM1-218ENST00000534516 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
NCAM1-218ENST00000534516 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.45
NCAM1-218ENST00000534516 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.43
NCAM1-218ENST00000534516 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
NCAM1-218ENST00000534516 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
NCAM1-218ENST00000534516 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
NCAM1-218ENST00000534516 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
NCAM1-218ENST00000534516 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
NCAM1-218ENST00000534516 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
NCAM1-218ENST00000534516 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
NCAM1-218ENST00000534516 ADRA2BP18089 450 aa17.37■□□□□ 0.37
NCAM1-218ENST00000534516 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
NCAM1-218ENST00000534516 MSH5O43196 834 aa17.22■□□□□ 0.35
NCAM1-218ENST00000534516 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
NCAM1-218ENST00000534516 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
NCAM1-218ENST00000534516 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
NCAM1-218ENST00000534516 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
NCAM1-218ENST00000534516 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
NCAM1-218ENST00000534516 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
NCAM1-218ENST00000534516 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
NCAM1-218ENST00000534516 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
NCAM1-218ENST00000534516 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
NCAM1-218ENST00000534516 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
NCAM1-218ENST00000534516 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
NCAM1-218ENST00000534516 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
NCAM1-218ENST00000534516 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
NCAM1-218ENST00000534516 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
NCAM1-218ENST00000534516 WIZO95785 1651 aa16.42■□□□□ 0.22
NCAM1-218ENST00000534516 NESP48681 1621 aa16.32■□□□□ 0.2
NCAM1-218ENST00000534516 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
NCAM1-218ENST00000534516 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
NCAM1-218ENST00000534516 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
NCAM1-218ENST00000534516 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
NCAM1-218ENST00000534516 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
NCAM1-218ENST00000534516 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
NCAM1-218ENST00000534516 THOC2Q8NI27 1593 aaKnown RBP16.06■□□□□ 0.16
NCAM1-218ENST00000534516 CUX2O14529 1486 aa16.04■□□□□ 0.16
NCAM1-218ENST00000534516 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
NCAM1-218ENST00000534516 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
NCAM1-218ENST00000534516 CFTRP13569 1480 aa15.98■□□□□ 0.15
NCAM1-218ENST00000534516 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
NCAM1-218ENST00000534516 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
NCAM1-218ENST00000534516 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
NCAM1-218ENST00000534516 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
NCAM1-218ENST00000534516 PRDM2Q13029 1718 aa15.89■□□□□ 0.13
NCAM1-218ENST00000534516 WDR62O43379 1518 aa15.88■□□□□ 0.13
NCAM1-218ENST00000534516 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
NCAM1-218ENST00000534516 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
NCAM1-218ENST00000534516 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
NCAM1-218ENST00000534516 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
NCAM1-218ENST00000534516 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
NCAM1-218ENST00000534516 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
NCAM1-218ENST00000534516 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
NCAM1-218ENST00000534516 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
NCAM1-218ENST00000534516 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
NCAM1-218ENST00000534516 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
NCAM1-218ENST00000534516 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
NCAM1-218ENST00000534516 CUX1P39880 1505 aa15.55■□□□□ 0.08
NCAM1-218ENST00000534516 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
NCAM1-218ENST00000534516 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
NCAM1-218ENST00000534516 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
NCAM1-218ENST00000534516 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
NCAM1-218ENST00000534516 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
NCAM1-218ENST00000534516 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
NCAM1-218ENST00000534516 SOGA1O94964 1423 aa15.46■□□□□ 0.07
NCAM1-218ENST00000534516 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
NCAM1-218ENST00000534516 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
NCAM1-218ENST00000534516 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
NCAM1-218ENST00000534516 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
NCAM1-218ENST00000534516 CHD1O14646 1710 aa15.36■□□□□ 0.05
NCAM1-218ENST00000534516 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
NCAM1-218ENST00000534516 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
NCAM1-218ENST00000534516 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
NCAM1-218ENST00000534516 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
NCAM1-218ENST00000534516 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
NCAM1-218ENST00000534516 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
NCAM1-218ENST00000534516 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
NCAM1-218ENST00000534516 FBLN2P98095 1184 aa15.29■□□□□ 0.04
NCAM1-218ENST00000534516 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
NCAM1-218ENST00000534516 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
NCAM1-218ENST00000534516 GRIN2BQ13224 1484 aa15.27■□□□□ 0.03
NCAM1-218ENST00000534516 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
NCAM1-218ENST00000534516 MAGI1Q96QZ7 1491 aaPredicted RBP15.22■□□□□ 0.03
NCAM1-218ENST00000534516 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
NCAM1-218ENST00000534516 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
NCAM1-218ENST00000534516 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
NCAM1-218ENST00000534516 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
NCAM1-218ENST00000534516 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
NCAM1-218ENST00000534516 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms