RNA–Protein interactions for RNA: ENST00000534455.5

SC5D-209, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-209ENST00000534455 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
SC5D-209ENST00000534455 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
SC5D-209ENST00000534455 ABCC9O60706 1549 aa35.5■■■■□ 3.27
SC5D-209ENST00000534455 RB1CC1Q8TDY2 1594 aa33.86■■■■□ 3.01
SC5D-209ENST00000534455 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
SC5D-209ENST00000534455 NACADO15069 1562 aa33.65■■■□□ 2.98
SC5D-209ENST00000534455 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
SC5D-209ENST00000534455 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
SC5D-209ENST00000534455 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
SC5D-209ENST00000534455 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
SC5D-209ENST00000534455 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
SC5D-209ENST00000534455 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
SC5D-209ENST00000534455 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.84
SC5D-209ENST00000534455 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
SC5D-209ENST00000534455 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
SC5D-209ENST00000534455 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
SC5D-209ENST00000534455 EIF4G1Q04637 1599 aaKnown RBP32■■■□□ 2.71
SC5D-209ENST00000534455 CECR2Q9BXF3 1484 aa31.97■■■□□ 2.71
SC5D-209ENST00000534455 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
SC5D-209ENST00000534455 ATAD2BQ9ULI0 1458 aa30.99■■■□□ 2.55
SC5D-209ENST00000534455 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
SC5D-209ENST00000534455 SMARCA2P51531 1590 aa30.95■■■□□ 2.54
SC5D-209ENST00000534455 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
SC5D-209ENST00000534455 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
SC5D-209ENST00000534455 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
SC5D-209ENST00000534455 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
SC5D-209ENST00000534455 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
SC5D-209ENST00000534455 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
SC5D-209ENST00000534455 CUX2O14529 1486 aa30.52■■■□□ 2.48
SC5D-209ENST00000534455 NESP48681 1621 aa30.5■■■□□ 2.47
SC5D-209ENST00000534455 LAMC3Q9Y6N6 1575 aa30.33■■■□□ 2.45
SC5D-209ENST00000534455 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
SC5D-209ENST00000534455 WIZO95785 1651 aa30.28■■■□□ 2.44
SC5D-209ENST00000534455 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
SC5D-209ENST00000534455 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
SC5D-209ENST00000534455 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
SC5D-209ENST00000534455 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
SC5D-209ENST00000534455 KIF21AQ7Z4S6 1674 aa30.08■■■□□ 2.41
SC5D-209ENST00000534455 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
SC5D-209ENST00000534455 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
SC5D-209ENST00000534455 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
SC5D-209ENST00000534455 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
SC5D-209ENST00000534455 CFTRP13569 1480 aa29.81■■■□□ 2.36
SC5D-209ENST00000534455 FANCD2Q9BXW9 1451 aa29.81■■■□□ 2.36
SC5D-209ENST00000534455 WDR62O43379 1518 aa29.78■■■□□ 2.36
SC5D-209ENST00000534455 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
SC5D-209ENST00000534455 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
SC5D-209ENST00000534455 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
SC5D-209ENST00000534455 ABCC8Q09428 1581 aa29.26■■■□□ 2.27
SC5D-209ENST00000534455 OSCARQ8IYS5 282 aa29.25■■■□□ 2.27
SC5D-209ENST00000534455 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
SC5D-209ENST00000534455 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
SC5D-209ENST00000534455 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
SC5D-209ENST00000534455 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
SC5D-209ENST00000534455 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
SC5D-209ENST00000534455 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
SC5D-209ENST00000534455 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
SC5D-209ENST00000534455 POLA1P09884 1462 aaPredicted RBP28.95■■■□□ 2.22
SC5D-209ENST00000534455 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
SC5D-209ENST00000534455 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
SC5D-209ENST00000534455 SOGA1O94964 1423 aa28.89■■■□□ 2.22
SC5D-209ENST00000534455 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
SC5D-209ENST00000534455 FBLN2P98095 1184 aa28.83■■■□□ 2.21
SC5D-209ENST00000534455 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
SC5D-209ENST00000534455 TDRD9Q8NDG6 1382 aaKnown RBP28.8■■■□□ 2.2
SC5D-209ENST00000534455 CUX1P39880 1505 aa28.79■■■□□ 2.2
SC5D-209ENST00000534455 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
SC5D-209ENST00000534455 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
SC5D-209ENST00000534455 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
SC5D-209ENST00000534455 CHD1O14646 1710 aa28.71■■■□□ 2.19
SC5D-209ENST00000534455 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
SC5D-209ENST00000534455 WDR97A6NE52 1622 aa28.68■■■□□ 2.18
SC5D-209ENST00000534455 ARHGEF11O15085 1522 aa28.67■■■□□ 2.18
SC5D-209ENST00000534455 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
SC5D-209ENST00000534455 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
SC5D-209ENST00000534455 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
SC5D-209ENST00000534455 MAGI1Q96QZ7 1491 aaPredicted RBP28.57■■■□□ 2.16
SC5D-209ENST00000534455 CYB5RLQ6IPT4 315 aa28.56■■■□□ 2.16
SC5D-209ENST00000534455 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
SC5D-209ENST00000534455 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
SC5D-209ENST00000534455 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
SC5D-209ENST00000534455 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
SC5D-209ENST00000534455 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
SC5D-209ENST00000534455 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
SC5D-209ENST00000534455 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.13
SC5D-209ENST00000534455 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
SC5D-209ENST00000534455 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
SC5D-209ENST00000534455 CLASP1Q7Z460 1538 aa28.37■■■□□ 2.13
SC5D-209ENST00000534455 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
SC5D-209ENST00000534455 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
SC5D-209ENST00000534455 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
SC5D-209ENST00000534455 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
SC5D-209ENST00000534455 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
SC5D-209ENST00000534455 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
SC5D-209ENST00000534455 NUP160Q12769 1436 aa28.08■■■□□ 2.09
SC5D-209ENST00000534455 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
SC5D-209ENST00000534455 ERCC6L2Q5T890 1561 aa27.94■■■□□ 2.06
SC5D-209ENST00000534455 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
SC5D-209ENST00000534455 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
SC5D-209ENST00000534455 JPH4Q96JJ6 628 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms