RNA–Protein interactions for RNA: ENST00000534367.1

PDE4DIP-234, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-234ENST00000534367 NISCHQ9Y2I1 1504 aa12.63□□□□□ -0.39
PDE4DIP-234ENST00000534367 ABCC9O60706 1549 aa11.47□□□□□ -0.57
PDE4DIP-234ENST00000534367 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
PDE4DIP-234ENST00000534367 CHIC1Q5VXU3 224 aa11.36□□□□□ -0.59
PDE4DIP-234ENST00000534367 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
PDE4DIP-234ENST00000534367 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
PDE4DIP-234ENST00000534367 NACADO15069 1562 aa10.8□□□□□ -0.68
PDE4DIP-234ENST00000534367 AEBP2Q6ZN18 517 aaPredicted RBP10.78□□□□□ -0.68
PDE4DIP-234ENST00000534367 MYO15BQ96JP2 1530 aa10.69□□□□□ -0.7
PDE4DIP-234ENST00000534367 BICRAQ9NZM4 1560 aa10.68□□□□□ -0.7
PDE4DIP-234ENST00000534367 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
PDE4DIP-234ENST00000534367 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDE4DIP-234ENST00000534367 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
PDE4DIP-234ENST00000534367 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
PDE4DIP-234ENST00000534367 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
PDE4DIP-234ENST00000534367 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
PDE4DIP-234ENST00000534367 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.75
PDE4DIP-234ENST00000534367 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
PDE4DIP-234ENST00000534367 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
PDE4DIP-234ENST00000534367 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
PDE4DIP-234ENST00000534367 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
PDE4DIP-234ENST00000534367 NCAPD3P42695 1498 aa10.02□□□□□ -0.81
PDE4DIP-234ENST00000534367 PHF23Q9BUL5 403 aaPredicted RBP10.01□□□□□ -0.81
PDE4DIP-234ENST00000534367 CUX2O14529 1486 aa10□□□□□ -0.81
PDE4DIP-234ENST00000534367 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
PDE4DIP-234ENST00000534367 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
PDE4DIP-234ENST00000534367 NESP48681 1621 aa9.86□□□□□ -0.83
PDE4DIP-234ENST00000534367 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
PDE4DIP-234ENST00000534367 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
PDE4DIP-234ENST00000534367 SMARCA2P51531 1590 aa9.85□□□□□ -0.83
PDE4DIP-234ENST00000534367 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
PDE4DIP-234ENST00000534367 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
PDE4DIP-234ENST00000534367 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
PDE4DIP-234ENST00000534367 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
PDE4DIP-234ENST00000534367 LAMC3Q9Y6N6 1575 aa9.75□□□□□ -0.85
PDE4DIP-234ENST00000534367 MROH2BQ7Z745 1585 aa9.74□□□□□ -0.85
PDE4DIP-234ENST00000534367 KIF21AQ7Z4S6 1674 aa9.7□□□□□ -0.86
PDE4DIP-234ENST00000534367 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
PDE4DIP-234ENST00000534367 CADPSQ9ULU8 1353 aa9.66□□□□□ -0.86
PDE4DIP-234ENST00000534367 WDR62O43379 1518 aa9.66□□□□□ -0.86
PDE4DIP-234ENST00000534367 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
PDE4DIP-234ENST00000534367 PLPPR3Q6T4P5 718 aa9.61□□□□□ -0.87
PDE4DIP-234ENST00000534367 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
PDE4DIP-234ENST00000534367 WIZO95785 1651 aa9.57□□□□□ -0.88
PDE4DIP-234ENST00000534367 CFTRP13569 1480 aa9.55□□□□□ -0.88
PDE4DIP-234ENST00000534367 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
PDE4DIP-234ENST00000534367 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
PDE4DIP-234ENST00000534367 URB2Q14146 1524 aaKnown RBP9.51□□□□□ -0.89
PDE4DIP-234ENST00000534367 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
PDE4DIP-234ENST00000534367 RSF1Q96T23 1441 aaPredicted RBP9.48□□□□□ -0.89
PDE4DIP-234ENST00000534367 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
PDE4DIP-234ENST00000534367 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
PDE4DIP-234ENST00000534367 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
PDE4DIP-234ENST00000534367 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
PDE4DIP-234ENST00000534367 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
PDE4DIP-234ENST00000534367 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
PDE4DIP-234ENST00000534367 IFT140Q96RY7 1462 aa9.37□□□□□ -0.91
PDE4DIP-234ENST00000534367 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
PDE4DIP-234ENST00000534367 ARHGEF11O15085 1522 aa9.36□□□□□ -0.91
PDE4DIP-234ENST00000534367 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
PDE4DIP-234ENST00000534367 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
PDE4DIP-234ENST00000534367 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
PDE4DIP-234ENST00000534367 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
PDE4DIP-234ENST00000534367 EIF4G3O43432 1585 aaKnown RBP9.31□□□□□ -0.92
PDE4DIP-234ENST00000534367 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
PDE4DIP-234ENST00000534367 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
PDE4DIP-234ENST00000534367 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
PDE4DIP-234ENST00000534367 AQRO60306 1485 aaKnown RBP eCLIP9.26□□□□□ -0.93
PDE4DIP-234ENST00000534367 POLA1P09884 1462 aaPredicted RBP9.25□□□□□ -0.93
PDE4DIP-234ENST00000534367 CHD1O14646 1710 aa9.24□□□□□ -0.93
PDE4DIP-234ENST00000534367 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
PDE4DIP-234ENST00000534367 KCNA4P22459 653 aa9.2□□□□□ -0.94
PDE4DIP-234ENST00000534367 RAD54L2Q9Y4B4 1467 aa9.2□□□□□ -0.94
PDE4DIP-234ENST00000534367 CYB5RLQ6IPT4 315 aa9.19□□□□□ -0.94
PDE4DIP-234ENST00000534367 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
PDE4DIP-234ENST00000534367 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
PDE4DIP-234ENST00000534367 CUX1P39880 1505 aa9.15□□□□□ -0.94
PDE4DIP-234ENST00000534367 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.94
PDE4DIP-234ENST00000534367 SOGA1O94964 1423 aa9.14□□□□□ -0.95
PDE4DIP-234ENST00000534367 FGD5Q6ZNL6 1462 aa9.14□□□□□ -0.95
PDE4DIP-234ENST00000534367 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
PDE4DIP-234ENST00000534367 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
PDE4DIP-234ENST00000534367 SENP3Q9H4L4 574 aaPredicted RBP9.11□□□□□ -0.95
PDE4DIP-234ENST00000534367 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
PDE4DIP-234ENST00000534367 GRIN2BQ13224 1484 aa9.1□□□□□ -0.95
PDE4DIP-234ENST00000534367 SYNJ1O43426 1573 aa9.09□□□□□ -0.95
PDE4DIP-234ENST00000534367 FBLN2P98095 1184 aa9.09□□□□□ -0.95
PDE4DIP-234ENST00000534367 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
PDE4DIP-234ENST00000534367 ABCA10Q8WWZ4 1543 aa9.08□□□□□ -0.96
PDE4DIP-234ENST00000534367 ABCA5Q8WWZ7 1642 aa9.08□□□□□ -0.96
PDE4DIP-234ENST00000534367 ERCC6L2Q5T890 1561 aa9.05□□□□□ -0.96
PDE4DIP-234ENST00000534367 GAPVD1Q14C86 1478 aa9.05□□□□□ -0.96
PDE4DIP-234ENST00000534367 TRHP20396 242 aaPredicted RBP9.05□□□□□ -0.96
PDE4DIP-234ENST00000534367 NUP160Q12769 1436 aa9.05□□□□□ -0.96
PDE4DIP-234ENST00000534367 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
PDE4DIP-234ENST00000534367 PBRM1Q86U86 1689 aa9.04□□□□□ -0.96
PDE4DIP-234ENST00000534367 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
PDE4DIP-234ENST00000534367 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
PDE4DIP-234ENST00000534367 CEP170Q5SW79 1584 aa9□□□□□ -0.97
PDE4DIP-234ENST00000534367 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms