RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
NCAPD3-212ENST00000534290 ABCC9O60706 1549 aa22.77■■□□□ 1.24
NCAPD3-212ENST00000534290 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
NCAPD3-212ENST00000534290 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
NCAPD3-212ENST00000534290 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
NCAPD3-212ENST00000534290 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
NCAPD3-212ENST00000534290 NACADO15069 1562 aa21.36■■□□□ 1.01
NCAPD3-212ENST00000534290 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
NCAPD3-212ENST00000534290 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
NCAPD3-212ENST00000534290 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
NCAPD3-212ENST00000534290 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
NCAPD3-212ENST00000534290 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
NCAPD3-212ENST00000534290 DCAF1Q9Y4B6 1507 aa20.65■□□□□ 0.9
NCAPD3-212ENST00000534290 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
NCAPD3-212ENST00000534290 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
NCAPD3-212ENST00000534290 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
NCAPD3-212ENST00000534290 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
NCAPD3-212ENST00000534290 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
NCAPD3-212ENST00000534290 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
NCAPD3-212ENST00000534290 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
NCAPD3-212ENST00000534290 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
NCAPD3-212ENST00000534290 CUX2O14529 1486 aa19.67■□□□□ 0.74
NCAPD3-212ENST00000534290 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
NCAPD3-212ENST00000534290 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
NCAPD3-212ENST00000534290 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
NCAPD3-212ENST00000534290 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
NCAPD3-212ENST00000534290 NESP48681 1621 aa19.5■□□□□ 0.71
NCAPD3-212ENST00000534290 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
NCAPD3-212ENST00000534290 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
NCAPD3-212ENST00000534290 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
NCAPD3-212ENST00000534290 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
NCAPD3-212ENST00000534290 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
NCAPD3-212ENST00000534290 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
NCAPD3-212ENST00000534290 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
NCAPD3-212ENST00000534290 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
NCAPD3-212ENST00000534290 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
NCAPD3-212ENST00000534290 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
NCAPD3-212ENST00000534290 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
NCAPD3-212ENST00000534290 WIZO95785 1651 aa19.04■□□□□ 0.64
NCAPD3-212ENST00000534290 WDR62O43379 1518 aa18.99■□□□□ 0.63
NCAPD3-212ENST00000534290 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
NCAPD3-212ENST00000534290 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
NCAPD3-212ENST00000534290 CFTRP13569 1480 aa18.89■□□□□ 0.61
NCAPD3-212ENST00000534290 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
NCAPD3-212ENST00000534290 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
NCAPD3-212ENST00000534290 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
NCAPD3-212ENST00000534290 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
NCAPD3-212ENST00000534290 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
NCAPD3-212ENST00000534290 ZNF608Q9ULD9 1512 aaPredicted RBP18.59■□□□□ 0.57
NCAPD3-212ENST00000534290 IFT140Q96RY7 1462 aa18.58■□□□□ 0.57
NCAPD3-212ENST00000534290 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
NCAPD3-212ENST00000534290 PRDM2Q13029 1718 aa18.52■□□□□ 0.56
NCAPD3-212ENST00000534290 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
NCAPD3-212ENST00000534290 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
NCAPD3-212ENST00000534290 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
NCAPD3-212ENST00000534290 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
NCAPD3-212ENST00000534290 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
NCAPD3-212ENST00000534290 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
NCAPD3-212ENST00000534290 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.543e-7■■□□□ 13.5
NCAPD3-212ENST00000534290 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
NCAPD3-212ENST00000534290 FBLN2P98095 1184 aa18.41■□□□□ 0.54
NCAPD3-212ENST00000534290 EIF4G3O43432 1585 aaKnown RBP18.39■□□□□ 0.53
NCAPD3-212ENST00000534290 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-212ENST00000534290 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-212ENST00000534290 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
NCAPD3-212ENST00000534290 SOGA1O94964 1423 aa18.31■□□□□ 0.52
NCAPD3-212ENST00000534290 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
NCAPD3-212ENST00000534290 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
NCAPD3-212ENST00000534290 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
NCAPD3-212ENST00000534290 CHD1O14646 1710 aa18.27■□□□□ 0.52
NCAPD3-212ENST00000534290 CHMP7Q8WUX9 453 aaPredicted RBP18.24■□□□□ 0.51
NCAPD3-212ENST00000534290 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
NCAPD3-212ENST00000534290 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
NCAPD3-212ENST00000534290 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
NCAPD3-212ENST00000534290 CUX1P39880 1505 aa18.14■□□□□ 0.49
NCAPD3-212ENST00000534290 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
NCAPD3-212ENST00000534290 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
NCAPD3-212ENST00000534290 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
NCAPD3-212ENST00000534290 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
NCAPD3-212ENST00000534290 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
NCAPD3-212ENST00000534290 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
NCAPD3-212ENST00000534290 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
NCAPD3-212ENST00000534290 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
NCAPD3-212ENST00000534290 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
NCAPD3-212ENST00000534290 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
NCAPD3-212ENST00000534290 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
NCAPD3-212ENST00000534290 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
NCAPD3-212ENST00000534290 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
NCAPD3-212ENST00000534290 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
NCAPD3-212ENST00000534290 NUP160Q12769 1436 aa17.82■□□□□ 0.44
NCAPD3-212ENST00000534290 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
NCAPD3-212ENST00000534290 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
NCAPD3-212ENST00000534290 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
NCAPD3-212ENST00000534290 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
NCAPD3-212ENST00000534290 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
NCAPD3-212ENST00000534290 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
NCAPD3-212ENST00000534290 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
NCAPD3-212ENST00000534290 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
NCAPD3-212ENST00000534290 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
NCAPD3-212ENST00000534290 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms