RNA–Protein interactions for RNA: ENST00000534263.1

NELL1-212, Transcript of neural EGFL like 1, humanhuman

TSL 1 (best)

Gene NELL1, Length 1,037 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELL1-212ENST00000534263 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
NELL1-212ENST00000534263 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
NELL1-212ENST00000534263 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
NELL1-212ENST00000534263 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
NELL1-212ENST00000534263 ABCC9O60706 1549 aa19.51■□□□□ 0.71
NELL1-212ENST00000534263 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
NELL1-212ENST00000534263 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
NELL1-212ENST00000534263 NACADO15069 1562 aa18.42■□□□□ 0.54
NELL1-212ENST00000534263 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
NELL1-212ENST00000534263 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
NELL1-212ENST00000534263 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
NELL1-212ENST00000534263 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
NELL1-212ENST00000534263 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
NELL1-212ENST00000534263 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
NELL1-212ENST00000534263 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
NELL1-212ENST00000534263 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
NELL1-212ENST00000534263 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
NELL1-212ENST00000534263 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
NELL1-212ENST00000534263 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
NELL1-212ENST00000534263 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
NELL1-212ENST00000534263 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
NELL1-212ENST00000534263 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
NELL1-212ENST00000534263 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
NELL1-212ENST00000534263 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
NELL1-212ENST00000534263 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
NELL1-212ENST00000534263 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
NELL1-212ENST00000534263 SMARCA2P51531 1590 aa17■□□□□ 0.31
NELL1-212ENST00000534263 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
NELL1-212ENST00000534263 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
NELL1-212ENST00000534263 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
NELL1-212ENST00000534263 WIZO95785 1651 aa16.94■□□□□ 0.3
NELL1-212ENST00000534263 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
NELL1-212ENST00000534263 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
NELL1-212ENST00000534263 NESP48681 1621 aa16.81■□□□□ 0.28
NELL1-212ENST00000534263 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
NELL1-212ENST00000534263 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
NELL1-212ENST00000534263 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
NELL1-212ENST00000534263 CUX2O14529 1486 aa16.63■□□□□ 0.25
NELL1-212ENST00000534263 FOXD1Q16676 465 aa16.63■□□□□ 0.25
NELL1-212ENST00000534263 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
NELL1-212ENST00000534263 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
NELL1-212ENST00000534263 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
NELL1-212ENST00000534263 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
NELL1-212ENST00000534263 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
NELL1-212ENST00000534263 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
NELL1-212ENST00000534263 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
NELL1-212ENST00000534263 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
NELL1-212ENST00000534263 CFTRP13569 1480 aa16.42■□□□□ 0.22
NELL1-212ENST00000534263 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
NELL1-212ENST00000534263 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
NELL1-212ENST00000534263 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
NELL1-212ENST00000534263 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
NELL1-212ENST00000534263 WDR62O43379 1518 aa16.33■□□□□ 0.2
NELL1-212ENST00000534263 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
NELL1-212ENST00000534263 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
NELL1-212ENST00000534263 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
NELL1-212ENST00000534263 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
NELL1-212ENST00000534263 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
NELL1-212ENST00000534263 CUX1P39880 1505 aa16.02■□□□□ 0.15
NELL1-212ENST00000534263 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
NELL1-212ENST00000534263 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
NELL1-212ENST00000534263 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
NELL1-212ENST00000534263 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
NELL1-212ENST00000534263 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
NELL1-212ENST00000534263 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
NELL1-212ENST00000534263 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
NELL1-212ENST00000534263 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
NELL1-212ENST00000534263 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
NELL1-212ENST00000534263 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
NELL1-212ENST00000534263 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
NELL1-212ENST00000534263 CHD1O14646 1710 aa15.89■□□□□ 0.13
NELL1-212ENST00000534263 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
NELL1-212ENST00000534263 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
NELL1-212ENST00000534263 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
NELL1-212ENST00000534263 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
NELL1-212ENST00000534263 SOGA1O94964 1423 aa15.82■□□□□ 0.12
NELL1-212ENST00000534263 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
NELL1-212ENST00000534263 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
NELL1-212ENST00000534263 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
NELL1-212ENST00000534263 PBRM1Q86U86 1689 aa15.77■□□□□ 0.12
NELL1-212ENST00000534263 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
NELL1-212ENST00000534263 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
NELL1-212ENST00000534263 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
NELL1-212ENST00000534263 MSH5O43196 834 aa15.75■□□□□ 0.11
NELL1-212ENST00000534263 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
NELL1-212ENST00000534263 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
NELL1-212ENST00000534263 FBLN2P98095 1184 aa15.71■□□□□ 0.11
NELL1-212ENST00000534263 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
NELL1-212ENST00000534263 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
NELL1-212ENST00000534263 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
NELL1-212ENST00000534263 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
NELL1-212ENST00000534263 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
NELL1-212ENST00000534263 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
NELL1-212ENST00000534263 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
NELL1-212ENST00000534263 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
NELL1-212ENST00000534263 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
NELL1-212ENST00000534263 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
NELL1-212ENST00000534263 ADRA2BP18089 450 aa15.5■□□□□ 0.07
NELL1-212ENST00000534263 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
NELL1-212ENST00000534263 GRIN2AQ12879 1464 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms