RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
MS4A6A-220ENST00000533989 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
MS4A6A-220ENST00000533989 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
MS4A6A-220ENST00000533989 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
MS4A6A-220ENST00000533989 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
MS4A6A-220ENST00000533989 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
MS4A6A-220ENST00000533989 ABCC9O60706 1549 aa17.75■□□□□ 0.43
MS4A6A-220ENST00000533989 FOXD1Q16676 465 aa17.42■□□□□ 0.38
MS4A6A-220ENST00000533989 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
MS4A6A-220ENST00000533989 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
MS4A6A-220ENST00000533989 NACADO15069 1562 aa16.85■□□□□ 0.29
MS4A6A-220ENST00000533989 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
MS4A6A-220ENST00000533989 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
MS4A6A-220ENST00000533989 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
MS4A6A-220ENST00000533989 MSH5O43196 834 aa16.62■□□□□ 0.25
MS4A6A-220ENST00000533989 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
MS4A6A-220ENST00000533989 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
MS4A6A-220ENST00000533989 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
MS4A6A-220ENST00000533989 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
MS4A6A-220ENST00000533989 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
MS4A6A-220ENST00000533989 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
MS4A6A-220ENST00000533989 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
MS4A6A-220ENST00000533989 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
MS4A6A-220ENST00000533989 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
MS4A6A-220ENST00000533989 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
MS4A6A-220ENST00000533989 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
MS4A6A-220ENST00000533989 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
MS4A6A-220ENST00000533989 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
MS4A6A-220ENST00000533989 ADRA2BP18089 450 aa15.66■□□□□ 0.1
MS4A6A-220ENST00000533989 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
MS4A6A-220ENST00000533989 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
MS4A6A-220ENST00000533989 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
MS4A6A-220ENST00000533989 HMGXB3Q12766 1538 aa15.46■□□□□ 0.07
MS4A6A-220ENST00000533989 SMARCA4P51532 1647 aa15.46■□□□□ 0.06
MS4A6A-220ENST00000533989 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
MS4A6A-220ENST00000533989 CUX2O14529 1486 aa15.39■□□□□ 0.05
MS4A6A-220ENST00000533989 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
MS4A6A-220ENST00000533989 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
MS4A6A-220ENST00000533989 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
MS4A6A-220ENST00000533989 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.05
MS4A6A-220ENST00000533989 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
MS4A6A-220ENST00000533989 NESP48681 1621 aa15.25■□□□□ 0.03
MS4A6A-220ENST00000533989 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
MS4A6A-220ENST00000533989 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
MS4A6A-220ENST00000533989 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
MS4A6A-220ENST00000533989 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
MS4A6A-220ENST00000533989 WIZO95785 1651 aa15.03■□□□□ -0
MS4A6A-220ENST00000533989 KIF21AQ7Z4S6 1674 aa15.01□□□□□ -0.01
MS4A6A-220ENST00000533989 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
MS4A6A-220ENST00000533989 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
MS4A6A-220ENST00000533989 WDR62O43379 1518 aa14.95□□□□□ -0.02
MS4A6A-220ENST00000533989 CFTRP13569 1480 aa14.94□□□□□ -0.02
MS4A6A-220ENST00000533989 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
MS4A6A-220ENST00000533989 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
MS4A6A-220ENST00000533989 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
MS4A6A-220ENST00000533989 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
MS4A6A-220ENST00000533989 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
MS4A6A-220ENST00000533989 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
MS4A6A-220ENST00000533989 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
MS4A6A-220ENST00000533989 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
MS4A6A-220ENST00000533989 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
MS4A6A-220ENST00000533989 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
MS4A6A-220ENST00000533989 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
MS4A6A-220ENST00000533989 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
MS4A6A-220ENST00000533989 ZNF608Q9ULD9 1512 aaPredicted RBP14.57□□□□□ -0.08
MS4A6A-220ENST00000533989 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
MS4A6A-220ENST00000533989 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
MS4A6A-220ENST00000533989 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
MS4A6A-220ENST00000533989 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
MS4A6A-220ENST00000533989 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
MS4A6A-220ENST00000533989 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
MS4A6A-220ENST00000533989 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
MS4A6A-220ENST00000533989 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.1
MS4A6A-220ENST00000533989 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
MS4A6A-220ENST00000533989 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
MS4A6A-220ENST00000533989 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
MS4A6A-220ENST00000533989 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
MS4A6A-220ENST00000533989 SOGA1O94964 1423 aa14.4□□□□□ -0.1
MS4A6A-220ENST00000533989 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
MS4A6A-220ENST00000533989 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
MS4A6A-220ENST00000533989 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
MS4A6A-220ENST00000533989 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
MS4A6A-220ENST00000533989 CUX1P39880 1505 aa14.35□□□□□ -0.11
MS4A6A-220ENST00000533989 CHD1O14646 1710 aa14.31□□□□□ -0.12
MS4A6A-220ENST00000533989 FBLN2P98095 1184 aa14.3□□□□□ -0.12
MS4A6A-220ENST00000533989 MAGI1Q96QZ7 1491 aaPredicted RBP14.3□□□□□ -0.12
MS4A6A-220ENST00000533989 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
MS4A6A-220ENST00000533989 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
MS4A6A-220ENST00000533989 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
MS4A6A-220ENST00000533989 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
MS4A6A-220ENST00000533989 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
MS4A6A-220ENST00000533989 CLASP1Q7Z460 1538 aa14.25□□□□□ -0.13
MS4A6A-220ENST00000533989 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
MS4A6A-220ENST00000533989 ABCA10Q8WWZ4 1543 aa14.23□□□□□ -0.13
MS4A6A-220ENST00000533989 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
MS4A6A-220ENST00000533989 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
MS4A6A-220ENST00000533989 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
MS4A6A-220ENST00000533989 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
MS4A6A-220ENST00000533989 WRNQ14191 1432 aaPredicted RBP eCLIP14.17□□□□□ -0.14
MS4A6A-220ENST00000533989 PBRM1Q86U86 1689 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms