RNA–Protein interactions for RNA: ENST00000533911.1

GDPD5-216, Transcript of glycerophosphodiester phosphodiesterase domain containing 5, humanhuman

TSL 4

Gene GDPD5, Length 603 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD5-216ENST00000533911 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
GDPD5-216ENST00000533911 ABCC9O60706 1549 aa27.19■■□□□ 1.94
GDPD5-216ENST00000533911 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
GDPD5-216ENST00000533911 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
GDPD5-216ENST00000533911 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
GDPD5-216ENST00000533911 NACADO15069 1562 aa25.4■■□□□ 1.66
GDPD5-216ENST00000533911 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
GDPD5-216ENST00000533911 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
GDPD5-216ENST00000533911 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
GDPD5-216ENST00000533911 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
GDPD5-216ENST00000533911 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
GDPD5-216ENST00000533911 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
GDPD5-216ENST00000533911 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
GDPD5-216ENST00000533911 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
GDPD5-216ENST00000533911 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
GDPD5-216ENST00000533911 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
GDPD5-216ENST00000533911 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
GDPD5-216ENST00000533911 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
GDPD5-216ENST00000533911 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
GDPD5-216ENST00000533911 CUX2O14529 1486 aa23.59■■□□□ 1.37
GDPD5-216ENST00000533911 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
GDPD5-216ENST00000533911 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
GDPD5-216ENST00000533911 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
GDPD5-216ENST00000533911 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
GDPD5-216ENST00000533911 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
GDPD5-216ENST00000533911 NESP48681 1621 aa23.21■■□□□ 1.31
GDPD5-216ENST00000533911 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
GDPD5-216ENST00000533911 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
GDPD5-216ENST00000533911 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
GDPD5-216ENST00000533911 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
GDPD5-216ENST00000533911 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
GDPD5-216ENST00000533911 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
GDPD5-216ENST00000533911 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
GDPD5-216ENST00000533911 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
GDPD5-216ENST00000533911 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
GDPD5-216ENST00000533911 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
GDPD5-216ENST00000533911 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
GDPD5-216ENST00000533911 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
GDPD5-216ENST00000533911 WDR62O43379 1518 aa22.66■■□□□ 1.22
GDPD5-216ENST00000533911 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
GDPD5-216ENST00000533911 WIZO95785 1651 aa22.53■■□□□ 1.2
GDPD5-216ENST00000533911 FANCD2Q9BXW9 1451 aa22.48■■□□□ 1.19
GDPD5-216ENST00000533911 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
GDPD5-216ENST00000533911 CFTRP13569 1480 aa22.36■■□□□ 1.17
GDPD5-216ENST00000533911 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
GDPD5-216ENST00000533911 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
GDPD5-216ENST00000533911 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
GDPD5-216ENST00000533911 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
GDPD5-216ENST00000533911 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
GDPD5-216ENST00000533911 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
GDPD5-216ENST00000533911 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
GDPD5-216ENST00000533911 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
GDPD5-216ENST00000533911 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
GDPD5-216ENST00000533911 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
GDPD5-216ENST00000533911 TOPBP1Q92547 1522 aa22■■□□□ 1.11
GDPD5-216ENST00000533911 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
GDPD5-216ENST00000533911 CYB5RLQ6IPT4 315 aa21.97■■□□□ 1.11
GDPD5-216ENST00000533911 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
GDPD5-216ENST00000533911 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
GDPD5-216ENST00000533911 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
GDPD5-216ENST00000533911 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
GDPD5-216ENST00000533911 CHD1O14646 1710 aa21.89■■□□□ 1.1
GDPD5-216ENST00000533911 FBLN2P98095 1184 aa21.87■■□□□ 1.09
GDPD5-216ENST00000533911 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.097e-6■■■□□ 18.1
GDPD5-216ENST00000533911 ARAP1Q96P48 1450 aa21.83■■□□□ 1.09
GDPD5-216ENST00000533911 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
GDPD5-216ENST00000533911 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
GDPD5-216ENST00000533911 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
GDPD5-216ENST00000533911 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
GDPD5-216ENST00000533911 SOGA1O94964 1423 aa21.65■■□□□ 1.06
GDPD5-216ENST00000533911 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
GDPD5-216ENST00000533911 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
GDPD5-216ENST00000533911 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
GDPD5-216ENST00000533911 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
GDPD5-216ENST00000533911 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
GDPD5-216ENST00000533911 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
GDPD5-216ENST00000533911 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
GDPD5-216ENST00000533911 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
GDPD5-216ENST00000533911 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
GDPD5-216ENST00000533911 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
GDPD5-216ENST00000533911 CUX1P39880 1505 aa21.45■■□□□ 1.02
GDPD5-216ENST00000533911 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
GDPD5-216ENST00000533911 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
GDPD5-216ENST00000533911 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
GDPD5-216ENST00000533911 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
GDPD5-216ENST00000533911 GRIN2AQ12879 1464 aa21.24■□□□□ 0.99
GDPD5-216ENST00000533911 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
GDPD5-216ENST00000533911 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
GDPD5-216ENST00000533911 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
GDPD5-216ENST00000533911 NUP160Q12769 1436 aa21.15■□□□□ 0.98
GDPD5-216ENST00000533911 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
GDPD5-216ENST00000533911 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
GDPD5-216ENST00000533911 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
GDPD5-216ENST00000533911 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
GDPD5-216ENST00000533911 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
GDPD5-216ENST00000533911 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
GDPD5-216ENST00000533911 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
GDPD5-216ENST00000533911 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
GDPD5-216ENST00000533911 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
GDPD5-216ENST00000533911 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms