RNA–Protein interactions for RNA: ENST00000533661.1

SBF2-213, Transcript of SET binding factor 2, humanhuman

TSL 3

Gene SBF2, Length 999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF2-213ENST00000533661 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
SBF2-213ENST00000533661 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
SBF2-213ENST00000533661 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
SBF2-213ENST00000533661 SENP3Q9H4L4 574 aaPredicted RBP26.49■■□□□ 1.83
SBF2-213ENST00000533661 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
SBF2-213ENST00000533661 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
SBF2-213ENST00000533661 ABCC9O60706 1549 aa25.68■■□□□ 1.7
SBF2-213ENST00000533661 FOXD1Q16676 465 aa24.79■■□□□ 1.56
SBF2-213ENST00000533661 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
SBF2-213ENST00000533661 NACADO15069 1562 aa24.22■■□□□ 1.47
SBF2-213ENST00000533661 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
SBF2-213ENST00000533661 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
SBF2-213ENST00000533661 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
SBF2-213ENST00000533661 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
SBF2-213ENST00000533661 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
SBF2-213ENST00000533661 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
SBF2-213ENST00000533661 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
SBF2-213ENST00000533661 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
SBF2-213ENST00000533661 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
SBF2-213ENST00000533661 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
SBF2-213ENST00000533661 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SBF2-213ENST00000533661 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
SBF2-213ENST00000533661 MSH5O43196 834 aa23.14■■□□□ 1.29
SBF2-213ENST00000533661 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
SBF2-213ENST00000533661 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
SBF2-213ENST00000533661 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SBF2-213ENST00000533661 PIAS4Q8N2W9 510 aaPredicted RBP23.08■■□□□ 1.29
SBF2-213ENST00000533661 ADRA2BP18089 450 aa23.03■■□□□ 1.28
SBF2-213ENST00000533661 POTEDQ86YR6 584 aa22.86■■□□□ 1.25
SBF2-213ENST00000533661 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
SBF2-213ENST00000533661 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
SBF2-213ENST00000533661 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
SBF2-213ENST00000533661 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
SBF2-213ENST00000533661 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
SBF2-213ENST00000533661 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
SBF2-213ENST00000533661 CUX2O14529 1486 aa22.15■■□□□ 1.14
SBF2-213ENST00000533661 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
SBF2-213ENST00000533661 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
SBF2-213ENST00000533661 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
SBF2-213ENST00000533661 NESP48681 1621 aa22.02■■□□□ 1.11
SBF2-213ENST00000533661 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
SBF2-213ENST00000533661 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
SBF2-213ENST00000533661 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
SBF2-213ENST00000533661 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
SBF2-213ENST00000533661 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
SBF2-213ENST00000533661 WIZO95785 1651 aa21.73■■□□□ 1.07
SBF2-213ENST00000533661 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
SBF2-213ENST00000533661 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
SBF2-213ENST00000533661 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
SBF2-213ENST00000533661 WDR62O43379 1518 aa21.52■■□□□ 1.04
SBF2-213ENST00000533661 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
SBF2-213ENST00000533661 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
SBF2-213ENST00000533661 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
SBF2-213ENST00000533661 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
SBF2-213ENST00000533661 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
SBF2-213ENST00000533661 CFTRP13569 1480 aa21.36■■□□□ 1.01
SBF2-213ENST00000533661 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
SBF2-213ENST00000533661 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
SBF2-213ENST00000533661 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
SBF2-213ENST00000533661 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
SBF2-213ENST00000533661 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
SBF2-213ENST00000533661 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
SBF2-213ENST00000533661 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
SBF2-213ENST00000533661 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
SBF2-213ENST00000533661 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
SBF2-213ENST00000533661 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
SBF2-213ENST00000533661 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
SBF2-213ENST00000533661 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
SBF2-213ENST00000533661 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
SBF2-213ENST00000533661 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
SBF2-213ENST00000533661 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
SBF2-213ENST00000533661 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
SBF2-213ENST00000533661 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
SBF2-213ENST00000533661 CHD1O14646 1710 aa20.87■□□□□ 0.93
SBF2-213ENST00000533661 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
SBF2-213ENST00000533661 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
SBF2-213ENST00000533661 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
SBF2-213ENST00000533661 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
SBF2-213ENST00000533661 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
SBF2-213ENST00000533661 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
SBF2-213ENST00000533661 FBLN2P98095 1184 aa20.67■□□□□ 0.9
SBF2-213ENST00000533661 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
SBF2-213ENST00000533661 SOGA1O94964 1423 aa20.66■□□□□ 0.9
SBF2-213ENST00000533661 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
SBF2-213ENST00000533661 CUX1P39880 1505 aa20.62■□□□□ 0.89
SBF2-213ENST00000533661 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
SBF2-213ENST00000533661 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
SBF2-213ENST00000533661 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
SBF2-213ENST00000533661 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
SBF2-213ENST00000533661 PPP4R3CPQ6ZMV5 832 aa20.56■□□□□ 0.88
SBF2-213ENST00000533661 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
SBF2-213ENST00000533661 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
SBF2-213ENST00000533661 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
SBF2-213ENST00000533661 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
SBF2-213ENST00000533661 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
SBF2-213ENST00000533661 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
SBF2-213ENST00000533661 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
SBF2-213ENST00000533661 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
SBF2-213ENST00000533661 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
SBF2-213ENST00000533661 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms