RNA–Protein interactions for RNA: ENST00000533511.6

NUCB2-215, Transcript of nucleobindin 2, humanhuman

TSL 3

Gene NUCB2, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-215ENST00000533511 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
NUCB2-215ENST00000533511 ABCC9O60706 1549 aa35.3■■■■□ 3.24
NUCB2-215ENST00000533511 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
NUCB2-215ENST00000533511 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
NUCB2-215ENST00000533511 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
NUCB2-215ENST00000533511 NACADO15069 1562 aa33.29■■■□□ 2.92
NUCB2-215ENST00000533511 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
NUCB2-215ENST00000533511 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
NUCB2-215ENST00000533511 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
NUCB2-215ENST00000533511 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
NUCB2-215ENST00000533511 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
NUCB2-215ENST00000533511 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
NUCB2-215ENST00000533511 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
NUCB2-215ENST00000533511 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
NUCB2-215ENST00000533511 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
NUCB2-215ENST00000533511 CC2D2AQ9P2K1 1620 aa31.81■■■□□ 2.68
NUCB2-215ENST00000533511 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
NUCB2-215ENST00000533511 EIF4G1Q04637 1599 aaKnown RBP31.74■■■□□ 2.67
NUCB2-215ENST00000533511 NCAPD3P42695 1498 aa30.76■■■□□ 2.51
NUCB2-215ENST00000533511 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
NUCB2-215ENST00000533511 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
NUCB2-215ENST00000533511 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
NUCB2-215ENST00000533511 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
NUCB2-215ENST00000533511 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
NUCB2-215ENST00000533511 BAZ1AQ9NRL2 1556 aaPredicted RBP30.46■■■□□ 2.47
NUCB2-215ENST00000533511 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
NUCB2-215ENST00000533511 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
NUCB2-215ENST00000533511 CUX2O14529 1486 aa30.38■■■□□ 2.45
NUCB2-215ENST00000533511 NESP48681 1621 aa30.29■■■□□ 2.44
NUCB2-215ENST00000533511 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
NUCB2-215ENST00000533511 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
NUCB2-215ENST00000533511 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
NUCB2-215ENST00000533511 AEBP2Q6ZN18 517 aaPredicted RBP29.98■■■□□ 2.39
NUCB2-215ENST00000533511 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
NUCB2-215ENST00000533511 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
NUCB2-215ENST00000533511 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
NUCB2-215ENST00000533511 WIZO95785 1651 aa29.85■■■□□ 2.37
NUCB2-215ENST00000533511 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
NUCB2-215ENST00000533511 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
NUCB2-215ENST00000533511 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
NUCB2-215ENST00000533511 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
NUCB2-215ENST00000533511 WDR62O43379 1518 aa29.52■■■□□ 2.32
NUCB2-215ENST00000533511 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
NUCB2-215ENST00000533511 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
NUCB2-215ENST00000533511 CFTRP13569 1480 aa29.48■■■□□ 2.31
NUCB2-215ENST00000533511 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
NUCB2-215ENST00000533511 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
NUCB2-215ENST00000533511 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
NUCB2-215ENST00000533511 OSCARQ8IYS5 282 aa29.11■■■□□ 2.25
NUCB2-215ENST00000533511 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
NUCB2-215ENST00000533511 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
NUCB2-215ENST00000533511 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
NUCB2-215ENST00000533511 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
NUCB2-215ENST00000533511 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
NUCB2-215ENST00000533511 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
NUCB2-215ENST00000533511 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
NUCB2-215ENST00000533511 AQRO60306 1485 aaKnown RBP eCLIP28.67■■■□□ 2.18
NUCB2-215ENST00000533511 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
NUCB2-215ENST00000533511 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
NUCB2-215ENST00000533511 FBLN2P98095 1184 aa28.6■■■□□ 2.17
NUCB2-215ENST00000533511 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
NUCB2-215ENST00000533511 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
NUCB2-215ENST00000533511 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
NUCB2-215ENST00000533511 SOGA1O94964 1423 aa28.56■■■□□ 2.16
NUCB2-215ENST00000533511 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
NUCB2-215ENST00000533511 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
NUCB2-215ENST00000533511 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
NUCB2-215ENST00000533511 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
NUCB2-215ENST00000533511 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
NUCB2-215ENST00000533511 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
NUCB2-215ENST00000533511 CHD1O14646 1710 aa28.43■■■□□ 2.14
NUCB2-215ENST00000533511 CUX1P39880 1505 aa28.4■■■□□ 2.14
NUCB2-215ENST00000533511 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
NUCB2-215ENST00000533511 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
NUCB2-215ENST00000533511 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
NUCB2-215ENST00000533511 GRIN2BQ13224 1484 aa28.28■■■□□ 2.12
NUCB2-215ENST00000533511 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
NUCB2-215ENST00000533511 ARAP1Q96P48 1450 aa28.24■■■□□ 2.11
NUCB2-215ENST00000533511 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
NUCB2-215ENST00000533511 TRHP20396 242 aaPredicted RBP28.18■■■□□ 2.1
NUCB2-215ENST00000533511 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
NUCB2-215ENST00000533511 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
NUCB2-215ENST00000533511 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
NUCB2-215ENST00000533511 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
NUCB2-215ENST00000533511 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
NUCB2-215ENST00000533511 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
NUCB2-215ENST00000533511 ABCA5Q8WWZ7 1642 aa28.02■■■□□ 2.08
NUCB2-215ENST00000533511 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
NUCB2-215ENST00000533511 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
NUCB2-215ENST00000533511 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.06
NUCB2-215ENST00000533511 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
NUCB2-215ENST00000533511 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
NUCB2-215ENST00000533511 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
NUCB2-215ENST00000533511 NUP160Q12769 1436 aa27.78■■■□□ 2.04
NUCB2-215ENST00000533511 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
NUCB2-215ENST00000533511 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
NUCB2-215ENST00000533511 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
NUCB2-215ENST00000533511 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
NUCB2-215ENST00000533511 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
NUCB2-215ENST00000533511 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms