RNA–Protein interactions for RNA: ENST00000533491.1

CSF3R-215, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-215ENST00000533491 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
CSF3R-215ENST00000533491 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
CSF3R-215ENST00000533491 ABCC9O60706 1549 aa26.85■■□□□ 1.89
CSF3R-215ENST00000533491 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
CSF3R-215ENST00000533491 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.82
CSF3R-215ENST00000533491 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
CSF3R-215ENST00000533491 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
CSF3R-215ENST00000533491 NACADO15069 1562 aa26.19■■□□□ 1.78
CSF3R-215ENST00000533491 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
CSF3R-215ENST00000533491 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
CSF3R-215ENST00000533491 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
CSF3R-215ENST00000533491 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
CSF3R-215ENST00000533491 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
CSF3R-215ENST00000533491 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
CSF3R-215ENST00000533491 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
CSF3R-215ENST00000533491 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
CSF3R-215ENST00000533491 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
CSF3R-215ENST00000533491 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
CSF3R-215ENST00000533491 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
CSF3R-215ENST00000533491 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
CSF3R-215ENST00000533491 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
CSF3R-215ENST00000533491 WIZO95785 1651 aa24.46■■□□□ 1.51
CSF3R-215ENST00000533491 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
CSF3R-215ENST00000533491 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
CSF3R-215ENST00000533491 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
CSF3R-215ENST00000533491 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
CSF3R-215ENST00000533491 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
CSF3R-215ENST00000533491 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
CSF3R-215ENST00000533491 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
CSF3R-215ENST00000533491 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
CSF3R-215ENST00000533491 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
CSF3R-215ENST00000533491 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
CSF3R-215ENST00000533491 CFTRP13569 1480 aa23.52■■□□□ 1.36
CSF3R-215ENST00000533491 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
CSF3R-215ENST00000533491 NESP48681 1621 aa23.48■■□□□ 1.35
CSF3R-215ENST00000533491 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
CSF3R-215ENST00000533491 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
CSF3R-215ENST00000533491 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
CSF3R-215ENST00000533491 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
CSF3R-215ENST00000533491 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
CSF3R-215ENST00000533491 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
CSF3R-215ENST00000533491 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
CSF3R-215ENST00000533491 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
CSF3R-215ENST00000533491 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
CSF3R-215ENST00000533491 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
CSF3R-215ENST00000533491 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
CSF3R-215ENST00000533491 CUX1P39880 1505 aa23.08■■□□□ 1.29
CSF3R-215ENST00000533491 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
CSF3R-215ENST00000533491 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
CSF3R-215ENST00000533491 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
CSF3R-215ENST00000533491 URB2Q14146 1524 aaKnown RBP23.02■■□□□ 1.28
CSF3R-215ENST00000533491 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
CSF3R-215ENST00000533491 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
CSF3R-215ENST00000533491 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
CSF3R-215ENST00000533491 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
CSF3R-215ENST00000533491 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
CSF3R-215ENST00000533491 WDR62O43379 1518 aa22.87■■□□□ 1.25
CSF3R-215ENST00000533491 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
CSF3R-215ENST00000533491 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
CSF3R-215ENST00000533491 SOGA1O94964 1423 aa22.74■■□□□ 1.23
CSF3R-215ENST00000533491 CUX2O14529 1486 aa22.73■■□□□ 1.23
CSF3R-215ENST00000533491 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
CSF3R-215ENST00000533491 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
CSF3R-215ENST00000533491 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
CSF3R-215ENST00000533491 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
CSF3R-215ENST00000533491 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
CSF3R-215ENST00000533491 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
CSF3R-215ENST00000533491 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
CSF3R-215ENST00000533491 EEA1Q15075 1411 aa22.57■■□□□ 1.2
CSF3R-215ENST00000533491 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
CSF3R-215ENST00000533491 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
CSF3R-215ENST00000533491 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
CSF3R-215ENST00000533491 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
CSF3R-215ENST00000533491 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.193e-14■■■■■ 55.4
CSF3R-215ENST00000533491 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
CSF3R-215ENST00000533491 IGF1RP08069 1367 aa22.47■■□□□ 1.19
CSF3R-215ENST00000533491 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
CSF3R-215ENST00000533491 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
CSF3R-215ENST00000533491 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
CSF3R-215ENST00000533491 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
CSF3R-215ENST00000533491 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
CSF3R-215ENST00000533491 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
CSF3R-215ENST00000533491 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
CSF3R-215ENST00000533491 KIF21BO75037 1637 aa22.35■■□□□ 1.17
CSF3R-215ENST00000533491 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
CSF3R-215ENST00000533491 CUL7Q14999 1698 aa22.32■■□□□ 1.16
CSF3R-215ENST00000533491 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
CSF3R-215ENST00000533491 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
CSF3R-215ENST00000533491 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
CSF3R-215ENST00000533491 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
CSF3R-215ENST00000533491 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
CSF3R-215ENST00000533491 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
CSF3R-215ENST00000533491 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
CSF3R-215ENST00000533491 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
CSF3R-215ENST00000533491 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
CSF3R-215ENST00000533491 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
CSF3R-215ENST00000533491 CHD1O14646 1710 aa22.09■■□□□ 1.13
CSF3R-215ENST00000533491 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
CSF3R-215ENST00000533491 FBLN2P98095 1184 aa22.07■■□□□ 1.12
CSF3R-215ENST00000533491 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms