RNA–Protein interactions for RNA: ENST00000533479.1

EFCAB8-203, Transcript of EF-hand calcium binding domain 8, humanhuman

TSL 3

Gene EFCAB8, Length 457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB8-203ENST00000533479 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
EFCAB8-203ENST00000533479 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
EFCAB8-203ENST00000533479 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
EFCAB8-203ENST00000533479 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
EFCAB8-203ENST00000533479 ABCC9O60706 1549 aa20.43■□□□□ 0.86
EFCAB8-203ENST00000533479 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
EFCAB8-203ENST00000533479 NACADO15069 1562 aa19.36■□□□□ 0.69
EFCAB8-203ENST00000533479 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
EFCAB8-203ENST00000533479 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
EFCAB8-203ENST00000533479 MYO15BQ96JP2 1530 aa19.14■□□□□ 0.65
EFCAB8-203ENST00000533479 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
EFCAB8-203ENST00000533479 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
EFCAB8-203ENST00000533479 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
EFCAB8-203ENST00000533479 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
EFCAB8-203ENST00000533479 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
EFCAB8-203ENST00000533479 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
EFCAB8-203ENST00000533479 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
EFCAB8-203ENST00000533479 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
EFCAB8-203ENST00000533479 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
EFCAB8-203ENST00000533479 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
EFCAB8-203ENST00000533479 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
EFCAB8-203ENST00000533479 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
EFCAB8-203ENST00000533479 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
EFCAB8-203ENST00000533479 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
EFCAB8-203ENST00000533479 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
EFCAB8-203ENST00000533479 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
EFCAB8-203ENST00000533479 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
EFCAB8-203ENST00000533479 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
EFCAB8-203ENST00000533479 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
EFCAB8-203ENST00000533479 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
EFCAB8-203ENST00000533479 CUX2O14529 1486 aa17.62■□□□□ 0.41
EFCAB8-203ENST00000533479 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
EFCAB8-203ENST00000533479 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
EFCAB8-203ENST00000533479 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
EFCAB8-203ENST00000533479 NESP48681 1621 aa17.57■□□□□ 0.4
EFCAB8-203ENST00000533479 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
EFCAB8-203ENST00000533479 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
EFCAB8-203ENST00000533479 WIZO95785 1651 aa17.37■□□□□ 0.37
EFCAB8-203ENST00000533479 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
EFCAB8-203ENST00000533479 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
EFCAB8-203ENST00000533479 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
EFCAB8-203ENST00000533479 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
EFCAB8-203ENST00000533479 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
EFCAB8-203ENST00000533479 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
EFCAB8-203ENST00000533479 WDR62O43379 1518 aa17.18■□□□□ 0.34
EFCAB8-203ENST00000533479 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
EFCAB8-203ENST00000533479 CFTRP13569 1480 aa17.15■□□□□ 0.34
EFCAB8-203ENST00000533479 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
EFCAB8-203ENST00000533479 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
EFCAB8-203ENST00000533479 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
EFCAB8-203ENST00000533479 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
EFCAB8-203ENST00000533479 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
EFCAB8-203ENST00000533479 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
EFCAB8-203ENST00000533479 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
EFCAB8-203ENST00000533479 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
EFCAB8-203ENST00000533479 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
EFCAB8-203ENST00000533479 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
EFCAB8-203ENST00000533479 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
EFCAB8-203ENST00000533479 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
EFCAB8-203ENST00000533479 FOXD1Q16676 465 aa16.71■□□□□ 0.27
EFCAB8-203ENST00000533479 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
EFCAB8-203ENST00000533479 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
EFCAB8-203ENST00000533479 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
EFCAB8-203ENST00000533479 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
EFCAB8-203ENST00000533479 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
EFCAB8-203ENST00000533479 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
EFCAB8-203ENST00000533479 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
EFCAB8-203ENST00000533479 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
EFCAB8-203ENST00000533479 SOGA1O94964 1423 aa16.55■□□□□ 0.24
EFCAB8-203ENST00000533479 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
EFCAB8-203ENST00000533479 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
EFCAB8-203ENST00000533479 CUX1P39880 1505 aa16.53■□□□□ 0.24
EFCAB8-203ENST00000533479 CHD1O14646 1710 aa16.52■□□□□ 0.24
EFCAB8-203ENST00000533479 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
EFCAB8-203ENST00000533479 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
EFCAB8-203ENST00000533479 FBLN2P98095 1184 aa16.45■□□□□ 0.22
EFCAB8-203ENST00000533479 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
EFCAB8-203ENST00000533479 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
EFCAB8-203ENST00000533479 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
EFCAB8-203ENST00000533479 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
EFCAB8-203ENST00000533479 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
EFCAB8-203ENST00000533479 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
EFCAB8-203ENST00000533479 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
EFCAB8-203ENST00000533479 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
EFCAB8-203ENST00000533479 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
EFCAB8-203ENST00000533479 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
EFCAB8-203ENST00000533479 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
EFCAB8-203ENST00000533479 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
EFCAB8-203ENST00000533479 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
EFCAB8-203ENST00000533479 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
EFCAB8-203ENST00000533479 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
EFCAB8-203ENST00000533479 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
EFCAB8-203ENST00000533479 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.2
EFCAB8-203ENST00000533479 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
EFCAB8-203ENST00000533479 ADRA2BP18089 450 aa16.2■□□□□ 0.18
EFCAB8-203ENST00000533479 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
EFCAB8-203ENST00000533479 NUP160Q12769 1436 aa16.18■□□□□ 0.18
EFCAB8-203ENST00000533479 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
EFCAB8-203ENST00000533479 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
EFCAB8-203ENST00000533479 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms