RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
SOX6-215ENST00000533411 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
SOX6-215ENST00000533411 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
SOX6-215ENST00000533411 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
SOX6-215ENST00000533411 ABCC9O60706 1549 aa14.63□□□□□ -0.07
SOX6-215ENST00000533411 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
SOX6-215ENST00000533411 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
SOX6-215ENST00000533411 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
SOX6-215ENST00000533411 NACADO15069 1562 aa13.9□□□□□ -0.18
SOX6-215ENST00000533411 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
SOX6-215ENST00000533411 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
SOX6-215ENST00000533411 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
SOX6-215ENST00000533411 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
SOX6-215ENST00000533411 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
SOX6-215ENST00000533411 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
SOX6-215ENST00000533411 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
SOX6-215ENST00000533411 FOXD1Q16676 465 aa13.59□□□□□ -0.23
SOX6-215ENST00000533411 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
SOX6-215ENST00000533411 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
SOX6-215ENST00000533411 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
SOX6-215ENST00000533411 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
SOX6-215ENST00000533411 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
SOX6-215ENST00000533411 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
SOX6-215ENST00000533411 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
SOX6-215ENST00000533411 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
SOX6-215ENST00000533411 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
SOX6-215ENST00000533411 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
SOX6-215ENST00000533411 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
SOX6-215ENST00000533411 MSH5O43196 834 aa12.8□□□□□ -0.36
SOX6-215ENST00000533411 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
SOX6-215ENST00000533411 MROH2BQ7Z745 1585 aa12.78□□□□□ -0.36
SOX6-215ENST00000533411 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
SOX6-215ENST00000533411 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
SOX6-215ENST00000533411 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
SOX6-215ENST00000533411 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
SOX6-215ENST00000533411 WIZO95785 1651 aa12.66□□□□□ -0.38
SOX6-215ENST00000533411 NESP48681 1621 aa12.63□□□□□ -0.39
SOX6-215ENST00000533411 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
SOX6-215ENST00000533411 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
SOX6-215ENST00000533411 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
SOX6-215ENST00000533411 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
SOX6-215ENST00000533411 ADRA2BP18089 450 aa12.52□□□□□ -0.41
SOX6-215ENST00000533411 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
SOX6-215ENST00000533411 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
SOX6-215ENST00000533411 CUX2O14529 1486 aa12.48□□□□□ -0.41
SOX6-215ENST00000533411 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
SOX6-215ENST00000533411 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
SOX6-215ENST00000533411 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
SOX6-215ENST00000533411 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
SOX6-215ENST00000533411 CFTRP13569 1480 aa12.34□□□□□ -0.43
SOX6-215ENST00000533411 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
SOX6-215ENST00000533411 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
SOX6-215ENST00000533411 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
SOX6-215ENST00000533411 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
SOX6-215ENST00000533411 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
SOX6-215ENST00000533411 WDR62O43379 1518 aa12.3□□□□□ -0.44
SOX6-215ENST00000533411 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
SOX6-215ENST00000533411 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SOX6-215ENST00000533411 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
SOX6-215ENST00000533411 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
SOX6-215ENST00000533411 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
SOX6-215ENST00000533411 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
SOX6-215ENST00000533411 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
SOX6-215ENST00000533411 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
SOX6-215ENST00000533411 TARBP1Q13395 1621 aaKnown RBP12.01□□□□□ -0.49
SOX6-215ENST00000533411 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
SOX6-215ENST00000533411 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
SOX6-215ENST00000533411 CUX1P39880 1505 aa12□□□□□ -0.49
SOX6-215ENST00000533411 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
SOX6-215ENST00000533411 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
SOX6-215ENST00000533411 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.49
SOX6-215ENST00000533411 SOGA1O94964 1423 aa11.94□□□□□ -0.5
SOX6-215ENST00000533411 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
SOX6-215ENST00000533411 CHD1O14646 1710 aa11.91□□□□□ -0.5
SOX6-215ENST00000533411 TDRD9Q8NDG6 1382 aaKnown RBP11.91□□□□□ -0.5
SOX6-215ENST00000533411 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
SOX6-215ENST00000533411 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
SOX6-215ENST00000533411 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
SOX6-215ENST00000533411 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
SOX6-215ENST00000533411 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
SOX6-215ENST00000533411 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
SOX6-215ENST00000533411 TOP2BQ02880 1626 aa11.84□□□□□ -0.51
SOX6-215ENST00000533411 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
SOX6-215ENST00000533411 FBLN2P98095 1184 aa11.83□□□□□ -0.52
SOX6-215ENST00000533411 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
SOX6-215ENST00000533411 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
SOX6-215ENST00000533411 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
SOX6-215ENST00000533411 ARHGEF11O15085 1522 aa11.78□□□□□ -0.52
SOX6-215ENST00000533411 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
SOX6-215ENST00000533411 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
SOX6-215ENST00000533411 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
SOX6-215ENST00000533411 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
SOX6-215ENST00000533411 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
SOX6-215ENST00000533411 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
SOX6-215ENST00000533411 GRIN2AQ12879 1464 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms