RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
VAV3-215ENST00000533398 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
VAV3-215ENST00000533398 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
VAV3-215ENST00000533398 ABCC9O60706 1549 aa20.46■□□□□ 0.87
VAV3-215ENST00000533398 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
VAV3-215ENST00000533398 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
VAV3-215ENST00000533398 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
VAV3-215ENST00000533398 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
VAV3-215ENST00000533398 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
VAV3-215ENST00000533398 NACADO15069 1562 aa19.23■□□□□ 0.67
VAV3-215ENST00000533398 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
VAV3-215ENST00000533398 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
VAV3-215ENST00000533398 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
VAV3-215ENST00000533398 FOXD1Q16676 465 aa18.96■□□□□ 0.63
VAV3-215ENST00000533398 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
VAV3-215ENST00000533398 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
VAV3-215ENST00000533398 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
VAV3-215ENST00000533398 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
VAV3-215ENST00000533398 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
VAV3-215ENST00000533398 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
VAV3-215ENST00000533398 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
VAV3-215ENST00000533398 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
VAV3-215ENST00000533398 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
VAV3-215ENST00000533398 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
VAV3-215ENST00000533398 MSH5O43196 834 aa17.82■□□□□ 0.44
VAV3-215ENST00000533398 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
VAV3-215ENST00000533398 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
VAV3-215ENST00000533398 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
VAV3-215ENST00000533398 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
VAV3-215ENST00000533398 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
VAV3-215ENST00000533398 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
VAV3-215ENST00000533398 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
VAV3-215ENST00000533398 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
VAV3-215ENST00000533398 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
VAV3-215ENST00000533398 NESP48681 1621 aa17.59■□□□□ 0.41
VAV3-215ENST00000533398 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
VAV3-215ENST00000533398 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
VAV3-215ENST00000533398 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
VAV3-215ENST00000533398 CUX2O14529 1486 aa17.54■□□□□ 0.4
VAV3-215ENST00000533398 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
VAV3-215ENST00000533398 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
VAV3-215ENST00000533398 ADRA2BP18089 450 aa17.46■□□□□ 0.39
VAV3-215ENST00000533398 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
VAV3-215ENST00000533398 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
VAV3-215ENST00000533398 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
VAV3-215ENST00000533398 WIZO95785 1651 aa17.36■□□□□ 0.37
VAV3-215ENST00000533398 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
VAV3-215ENST00000533398 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
VAV3-215ENST00000533398 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
VAV3-215ENST00000533398 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
VAV3-215ENST00000533398 WDR62O43379 1518 aa17.11■□□□□ 0.33
VAV3-215ENST00000533398 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
VAV3-215ENST00000533398 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
VAV3-215ENST00000533398 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
VAV3-215ENST00000533398 CFTRP13569 1480 aa17.03■□□□□ 0.32
VAV3-215ENST00000533398 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
VAV3-215ENST00000533398 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
VAV3-215ENST00000533398 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
VAV3-215ENST00000533398 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
VAV3-215ENST00000533398 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
VAV3-215ENST00000533398 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
VAV3-215ENST00000533398 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
VAV3-215ENST00000533398 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
VAV3-215ENST00000533398 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
VAV3-215ENST00000533398 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
VAV3-215ENST00000533398 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
VAV3-215ENST00000533398 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
VAV3-215ENST00000533398 RIMBP3BA6NNM3 1639 aa16.62■□□□□ 0.25
VAV3-215ENST00000533398 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
VAV3-215ENST00000533398 RIMBP3Q9UFD9 1639 aa16.62■□□□□ 0.25
VAV3-215ENST00000533398 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
VAV3-215ENST00000533398 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.24
VAV3-215ENST00000533398 CHD1O14646 1710 aa16.58■□□□□ 0.24
VAV3-215ENST00000533398 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
VAV3-215ENST00000533398 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
VAV3-215ENST00000533398 FBLN2P98095 1184 aa16.5■□□□□ 0.23
VAV3-215ENST00000533398 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
VAV3-215ENST00000533398 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
VAV3-215ENST00000533398 SOGA1O94964 1423 aa16.48■□□□□ 0.23
VAV3-215ENST00000533398 CUX1P39880 1505 aa16.48■□□□□ 0.23
VAV3-215ENST00000533398 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
VAV3-215ENST00000533398 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
VAV3-215ENST00000533398 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
VAV3-215ENST00000533398 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
VAV3-215ENST00000533398 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
VAV3-215ENST00000533398 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
VAV3-215ENST00000533398 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
VAV3-215ENST00000533398 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
VAV3-215ENST00000533398 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
VAV3-215ENST00000533398 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
VAV3-215ENST00000533398 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
VAV3-215ENST00000533398 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
VAV3-215ENST00000533398 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
VAV3-215ENST00000533398 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.2
VAV3-215ENST00000533398 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
VAV3-215ENST00000533398 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
VAV3-215ENST00000533398 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
VAV3-215ENST00000533398 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
VAV3-215ENST00000533398 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
VAV3-215ENST00000533398 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms